XLOC_019945 (CU207221.2)


Basic Information

Item Value
gene id XLOC_019945
gene name CU207221.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1330477 ~ 1333565 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039785
GTATTTTTATTCTCTGCAGATCAGCTCCTCCTCCACCAGTGAAGCTCCTCCTCCACCAGTGAAGCTCCTCCTCCTTCAGTTCAGCTATAAATACTGGAATATTCCCATCAGTCTACAAGTGAAGACGAGCGTCAGAGCATCAGGAAGAAGTGAAATCTgaaagacagagtttattgaaggacagagagaagatgagtgatccagaaccctgcagaattaaagcGGAAGAGGCTGAAACAGACATAAAGATGAAAAATGAGGAGAAACTTCATCATGTCTTGAAATGTTTGACCTGCACTGattgtggaaagagtttcgcATCCAAACAGAATCTCAAagttcacatgatgatccacaatgGAGAAAAGCCATTCACATGtagtcagtgtgggaagagtttcagacggTCATCCTCCCTTAATCAACACCTgctgatccacaccggagagaaaccacacaaatgtgatcaatgcggcaAAACCTTTTTGAAGCTTTCAAACTTGAGGGAGCATCTTAGAGTTCATACGAAGGAGAAACCTTATTCATGTTCTGAGTGCGGAAAGAGTTTTACAGtgcagtcaagtttgatgaaacatcagaagatccacaccggtgtgagagagtttgtgtgctttgagtgtggaaagacttttattacagcaaaacatcTGGAGCaacaccagaggattcacactggagagaaaccgtacgagtgttcacactgcgacaagagattcagtcacTCAGGACATCTGAAagcacatgagaggattcacactggagagaaaccgtacaagtgttcagaCTGCAACAAAACATTCAGTTACTTAGGACATATGAAAGCACACCGGATGATTCACACTaaagagaaaccttacaagtgttcacactgcgacaagagattcattTGCTCAGGAAACCTGAGAACGCACCAAAGGATTCACAATGAAGAGAAACCGTACAGTTGTTCACACTGCGGCAAGAGATTCTGTCAGTTAGGAAACCTGAAAACACACGAGATGAtgcacaccggagagaagccgtacaagtgttcacactgcgacaagagcttCAGTCGGTCAGGACATATGAAGAAAcatcagaggattcacactggagagaaaccgtacaagtgttcacactgcgacaagagattcagtcggTCAGGGTATTTGATCAAACATCtgaggattcacactggggagaaaccatacaagtgttcacactgtgacaagcgATTCAGTTGCGCTGGAAATCTGacaacacatgagaggattcacaccggagagaaaccttataagtgttcacactgcgacatgaGATTCAGCCACTTAGGAAGCCTGAAATGGCATAAAAGGATTCACACTGTAGAGAAACCACTCTAATGACACTGATGTAGCAAAACATTGTAATGTGTGgtgtttttcatattaatgtAACTAATaccttaaatattgtaaatacatcCAACTTCTGTATGAATCAATTCAGAGAGGCAGagtaattgcatttttaaaatggaaG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000099890

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039785 True 1524 mRNA 0.43 2 1330477 1333565

Neighbor

gene id symbol gene type direction distance location
XLOC_019942 si:ch73-138e16.5 coding upstream 23334 1300587 ~ 1307143 (+)
XLOC_019941 si:ch73-138e16.4 coding upstream 35578 1291651 ~ 1294899 (+)
XLOC_019940 si:ch73-138e16.3 coding upstream 40338 1285182 ~ 1290139 (+)
XLOC_019939 si:ch73-138e16.2 coding upstream 48131 1276680 ~ 1282346 (+)
XLOC_019938 CU570769.1 coding upstream 62657 1249788 ~ 1267820 (+)
XLOC_019946 znf45l coding downstream 18627 1352192 ~ 1361148 (+)
XLOC_019947 BX322657.1 coding downstream 43766 1377331 ~ 1384069 (+)
XLOC_019948 BX322657.3 coding downstream 50539 1384104 ~ 1407856 (+)
XLOC_019949 zgc:101130 coding downstream 87647 1421212 ~ 1424483 (+)
XLOC_019950 BX322657.2 coding downstream 98178 1431743 ~ 1433028 (+)
XLOC_019927 NA non-coding upstream 391650 923511 ~ 938827 (+)
XLOC_019924 NA non-coding upstream 512850 811600 ~ 817627 (+)
XLOC_019910 NA non-coding upstream 1021273 240168 ~ 309204 (+)
XLOC_019909 NA non-coding upstream 1043288 219167 ~ 287189 (+)
XLOC_019963 AL954741.1 non-coding downstream 243298 1576863 ~ 1577746 (+)
XLOC_019970 BX649416.2 non-coding downstream 316563 1650128 ~ 1653938 (+)
XLOC_019971 NA non-coding downstream 326622 1660187 ~ 1665471 (+)
XLOC_019977 BX649416.3 non-coding downstream 392003 1725568 ~ 1732110 (+)

Expression


Co-expression Network