G12357


Basic Information

Item Value
gene id G12357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 13548721 ~ 13548986 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU14618
gcttTAGGCGGTCCACTTCAgaatagcacttacagttgactggtgcaggtctagcagggcagaaattttacaaactaacttgttggaaaggtggcatcctataacagTGCCGTGTTgagagtcactgagctcttcagtaaggcaattctactgccaatgtttgtctatggagattgcatggctgtatgcccaaacctgtcagcaacaggtgtggctgaaatagctgaatccactagtttgaaggggtgtccatatatatagtgtat

Function

NR:

description
protein RCC2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14618 True 266 lncRNA 0.50 1 13548721 13548986

Neighbor

gene id symbol gene type direction distance location
pdzk1ip1 LOC106574040 coding upstream 107193 13436016 ~ 13441528 (+)
LOC110485322 LOC106574039 coding upstream 117604 13425566 ~ 13431117 (+)
LOC110485223 LOC106574083 coding upstream 137431 13409282 ~ 13411290 (+)
LOC110538561 LOC106574035 coding upstream 253269 13238613 ~ 13295452 (+)
LOC110526761 LOC106574030 coding upstream 324818 13214771 ~ 13223903 (+)
tm2d1 LOC106574044 coding downstream 185777 13734763 ~ 13753675 (+)
LOC110508285 LOC106574085 coding downstream 591510 14140496 ~ 14144946 (+)
LOC110485648 LOC106574045 coding downstream 613399 14162385 ~ 14171600 (+)
LOC110485979 LOC106574047 coding downstream 623533 14172519 ~ 14185257 (+)
LOC110486057 NA coding downstream 643481 14192456 ~ 14214939 (+)
G12356 NA non-coding upstream 263 13548227 ~ 13548458 (+)
G12353 NA non-coding upstream 1604 13546902 ~ 13547117 (+)
G12342 NA non-coding upstream 7052 13541453 ~ 13541669 (+)
G12335 NA non-coding upstream 12367 13536113 ~ 13536354 (+)
G12332 NA non-coding upstream 14572 13533944 ~ 13534149 (+)
G12363 NA non-coding downstream 4640 13553626 ~ 13553867 (+)
G12364 NA non-coding downstream 5379 13554365 ~ 13555155 (+)
G12367 NA non-coding downstream 7941 13556927 ~ 13557136 (+)
G12368 NA non-coding downstream 8383 13557369 ~ 13557607 (+)
G12371 NA non-coding downstream 10349 13559335 ~ 13559578 (+)
LOC110523899 LOC106574090 other upstream 2034339 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3387435 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 3557179 9980527 ~ 9991542 (+)
LOC118966784 LOC106574127 other upstream 4088768 9450932 ~ 9460358 (+)
G12410 NA other downstream 79877 13617059 ~ 13666871 (+)
G13380 NA other downstream 1130364 14679350 ~ 14679578 (+)
G13381 NA other downstream 1130712 14679698 ~ 14680027 (+)
G13391 NA other downstream 1151190 14700176 ~ 14700730 (+)

Expression


Co-expression Network