Gene
RNA
| Item | Value |
|---|---|
| gene id | G12411 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 13617745 ~ 13669028 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU14710 | True | 417 | lncRNA | 0.45 | 2 | 13617745 | 13669028 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdzk1ip1 | LOC106574040 | coding | upstream | 176217 | 13436016 ~ 13441528 (+) |
| LOC110485322 | LOC106574039 | coding | upstream | 186628 | 13425566 ~ 13431117 (+) |
| LOC110485223 | LOC106574083 | coding | upstream | 206455 | 13409282 ~ 13411290 (+) |
| LOC110538561 | LOC106574035 | coding | upstream | 322293 | 13238613 ~ 13295452 (+) |
| LOC110526761 | LOC106574030 | coding | upstream | 393842 | 13214771 ~ 13223903 (+) |
| tm2d1 | LOC106574044 | coding | downstream | 65735 | 13734763 ~ 13753675 (+) |
| LOC110508285 | LOC106574085 | coding | downstream | 471468 | 14140496 ~ 14144946 (+) |
| LOC110485648 | LOC106574045 | coding | downstream | 493357 | 14162385 ~ 14171600 (+) |
| LOC110485979 | LOC106574047 | coding | downstream | 503491 | 14172519 ~ 14185257 (+) |
| LOC110486057 | NA | coding | downstream | 523439 | 14192456 ~ 14214939 (+) |
| G12396 | NA | non-coding | upstream | 31842 | 13585704 ~ 13585903 (+) |
| G12390 | NA | non-coding | upstream | 36435 | 13581105 ~ 13581310 (+) |
| G12371 | NA | non-coding | upstream | 58167 | 13559335 ~ 13559578 (+) |
| G12368 | NA | non-coding | upstream | 60138 | 13557369 ~ 13557607 (+) |
| G12367 | NA | non-coding | upstream | 60609 | 13556927 ~ 13557136 (+) |
| G12497 | NA | non-coding | downstream | 106505 | 13775533 ~ 13775871 (+) |
| G12499 | NA | non-coding | downstream | 110579 | 13779607 ~ 13788862 (+) |
| G12504 | NA | non-coding | downstream | 126907 | 13795935 ~ 13799297 (+) |
| G12509 | NA | non-coding | downstream | 142908 | 13811936 ~ 13813273 (+) |
| G12535 | NA | non-coding | downstream | 184463 | 13853491 ~ 13853770 (+) |
| LOC110523899 | LOC106574090 | other | upstream | 2103363 | 11433102 ~ 11514427 (+) |
| gipc3 | LOC106574151 | other | upstream | 3456459 | 10140230 ~ 10162948 (+) |
| LOC110510920 | LOC106574155 | other | upstream | 3626203 | 9980527 ~ 9991542 (+) |
| LOC118966784 | LOC106574127 | other | upstream | 4157792 | 9450932 ~ 9460358 (+) |
| G13380 | NA | other | downstream | 1010322 | 14679350 ~ 14679578 (+) |
| G13381 | NA | other | downstream | 1010670 | 14679698 ~ 14680027 (+) |
| G13391 | NA | other | downstream | 1031148 | 14700176 ~ 14700730 (+) |
| G13434 | NA | other | downstream | 1142743 | 14811771 ~ 14812624 (+) |
