G12654


Basic Information

Item Value
gene id G12654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14051227 ~ 14051436 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15013
atacctcataatgacaaagcaaacataggttttaaaaacaaaaaccttatttacataagtattcagaccctttgctatgagactcgaaattgagctcaggtgcatcctgtttccactgatcatccttgagatgtttctacaacttggagtccacctgtggtaaattcaattgattggacatgatttggaaaggcacacaccttccTATAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15013 True 210 lncRNA 0.39 1 14051227 14051436

Neighbor

gene id symbol gene type direction distance location
tm2d1 LOC106574044 coding upstream 297552 13734763 ~ 13753675 (+)
pdzk1ip1 LOC106574040 coding upstream 609699 13436016 ~ 13441528 (+)
LOC110485322 LOC106574039 coding upstream 620110 13425566 ~ 13431117 (+)
LOC110485223 LOC106574083 coding upstream 639937 13409282 ~ 13411290 (+)
LOC110538561 LOC106574035 coding upstream 755775 13238613 ~ 13295452 (+)
LOC110508285 LOC106574085 coding downstream 89060 14140496 ~ 14144946 (+)
LOC110485648 LOC106574045 coding downstream 110949 14162385 ~ 14171600 (+)
LOC110485979 LOC106574047 coding downstream 121083 14172519 ~ 14185257 (+)
LOC110486057 NA coding downstream 141031 14192456 ~ 14214939 (+)
axdnd1 axdnd1 coding downstream 168731 14220167 ~ 14244412 (+)
G12653 NA non-coding upstream 1453 14049569 ~ 14049774 (+)
G12651 NA non-coding upstream 7703 14043317 ~ 14043524 (+)
G12650 NA non-coding upstream 10239 14040718 ~ 14040988 (+)
G12644 NA non-coding upstream 17222 14033236 ~ 14034005 (+)
G12587 NA non-coding upstream 90341 13960455 ~ 13960886 (+)
G12655 NA non-coding downstream 727 14052163 ~ 14052449 (+)
G12662 NA non-coding downstream 14164 14065600 ~ 14065866 (+)
G12663 NA non-coding downstream 17035 14068471 ~ 14068686 (+)
G12670 NA non-coding downstream 32035 14083471 ~ 14083976 (+)
G12675 NA non-coding downstream 39298 14090734 ~ 14091351 (+)
G12410 NA other upstream 419337 13617059 ~ 13666871 (+)
LOC110523899 LOC106574090 other upstream 2536845 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3889941 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 4059685 9980527 ~ 9991542 (+)
G13380 NA other downstream 627914 14679350 ~ 14679578 (+)
G13381 NA other downstream 628262 14679698 ~ 14680027 (+)
G13391 NA other downstream 648740 14700176 ~ 14700730 (+)
G13434 NA other downstream 760335 14811771 ~ 14812624 (+)

Expression


Co-expression Network