G12655


Basic Information

Item Value
gene id G12655
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14052163 ~ 14052449 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15014
cacacagccaagacaacgcaggagtggcttcgggaaaagtctctgaatgtccttgagtggcccagccagagcccggacttgaacccgatcgaacatctctggagagacctgaaaatagctgtgtagcgacactcccgatccaacctgacagagcttgagaggatctgcagagaaaaatgggagaaactccccaaaaacaggtgtgccaagcttgtagcgtcctgcacaagaagacttgaggctgtaatcgctaccaaagatgcttcaacaaagtactgagtaaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15014 True 287 lncRNA 0.39 1 14052163 14052449

Neighbor

gene id symbol gene type direction distance location
tm2d1 LOC106574044 coding upstream 298488 13734763 ~ 13753675 (+)
pdzk1ip1 LOC106574040 coding upstream 610635 13436016 ~ 13441528 (+)
LOC110485322 LOC106574039 coding upstream 621046 13425566 ~ 13431117 (+)
LOC110485223 LOC106574083 coding upstream 640873 13409282 ~ 13411290 (+)
LOC110538561 LOC106574035 coding upstream 756711 13238613 ~ 13295452 (+)
LOC110508285 LOC106574085 coding downstream 88047 14140496 ~ 14144946 (+)
LOC110485648 LOC106574045 coding downstream 109936 14162385 ~ 14171600 (+)
LOC110485979 LOC106574047 coding downstream 120070 14172519 ~ 14185257 (+)
LOC110486057 NA coding downstream 140018 14192456 ~ 14214939 (+)
axdnd1 axdnd1 coding downstream 167718 14220167 ~ 14244412 (+)
G12654 NA non-coding upstream 727 14051227 ~ 14051436 (+)
G12653 NA non-coding upstream 2389 14049569 ~ 14049774 (+)
G12651 NA non-coding upstream 8639 14043317 ~ 14043524 (+)
G12650 NA non-coding upstream 11175 14040718 ~ 14040988 (+)
G12644 NA non-coding upstream 18158 14033236 ~ 14034005 (+)
G12662 NA non-coding downstream 13151 14065600 ~ 14065866 (+)
G12663 NA non-coding downstream 16022 14068471 ~ 14068686 (+)
G12670 NA non-coding downstream 31022 14083471 ~ 14083976 (+)
G12675 NA non-coding downstream 38285 14090734 ~ 14091351 (+)
G12680 NA non-coding downstream 46559 14099008 ~ 14099291 (+)
G12410 NA other upstream 420273 13617059 ~ 13666871 (+)
LOC110523899 LOC106574090 other upstream 2537781 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3890877 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 4060621 9980527 ~ 9991542 (+)
G13380 NA other downstream 626901 14679350 ~ 14679578 (+)
G13381 NA other downstream 627249 14679698 ~ 14680027 (+)
G13391 NA other downstream 647727 14700176 ~ 14700730 (+)
G13434 NA other downstream 759322 14811771 ~ 14812624 (+)

Expression


Co-expression Network