G12662


Basic Information

Item Value
gene id G12662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14065600 ~ 14065866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15021
TTGTCTGGACAAGCAGACTTTTTAGTGTCTATTGCCTTTAGTGCTTTATAGACCTGAGCATAAGAAACAGGCTCAAAGTTCAAATGGTTCACATGAGGGCCTATATCATAGTTTACTGTAACAGAGCTTACATTAGAGGCCTGGGCCCCACCATTATCAAAAACTGAACCAGCAGATATGAAGTCCTTGTTAAAAAAAACTACAATATGGGCTTTATCCTTCACTTCATTAGAATCCATCATTAAATGGTCAGGAAGGTCAGAGgat

Function

NR:

description
RNA-directed DNA polymerase from mobile element jockey

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15021 True 267 lncRNA 0.40 1 14065600 14065866

Neighbor

gene id symbol gene type direction distance location
tm2d1 LOC106574044 coding upstream 311925 13734763 ~ 13753675 (+)
pdzk1ip1 LOC106574040 coding upstream 624072 13436016 ~ 13441528 (+)
LOC110485322 LOC106574039 coding upstream 634483 13425566 ~ 13431117 (+)
LOC110485223 LOC106574083 coding upstream 654310 13409282 ~ 13411290 (+)
LOC110538561 LOC106574035 coding upstream 770148 13238613 ~ 13295452 (+)
LOC110508285 LOC106574085 coding downstream 74630 14140496 ~ 14144946 (+)
LOC110485648 LOC106574045 coding downstream 96519 14162385 ~ 14171600 (+)
LOC110485979 LOC106574047 coding downstream 106653 14172519 ~ 14185257 (+)
LOC110486057 NA coding downstream 126601 14192456 ~ 14214939 (+)
axdnd1 axdnd1 coding downstream 154301 14220167 ~ 14244412 (+)
G12655 NA non-coding upstream 13151 14052163 ~ 14052449 (+)
G12654 NA non-coding upstream 14164 14051227 ~ 14051436 (+)
G12653 NA non-coding upstream 15826 14049569 ~ 14049774 (+)
G12651 NA non-coding upstream 22076 14043317 ~ 14043524 (+)
G12650 NA non-coding upstream 24612 14040718 ~ 14040988 (+)
G12663 NA non-coding downstream 2605 14068471 ~ 14068686 (+)
G12670 NA non-coding downstream 17605 14083471 ~ 14083976 (+)
G12675 NA non-coding downstream 24868 14090734 ~ 14091351 (+)
G12680 NA non-coding downstream 33142 14099008 ~ 14099291 (+)
G12692 NA non-coding downstream 60464 14126330 ~ 14190815 (+)
G12410 NA other upstream 433710 13617059 ~ 13666871 (+)
LOC110523899 LOC106574090 other upstream 2551218 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 3904314 10140230 ~ 10162948 (+)
LOC110510920 LOC106574155 other upstream 4074058 9980527 ~ 9991542 (+)
G13380 NA other downstream 613484 14679350 ~ 14679578 (+)
G13381 NA other downstream 613832 14679698 ~ 14680027 (+)
G13391 NA other downstream 634310 14700176 ~ 14700730 (+)
G13434 NA other downstream 745905 14811771 ~ 14812624 (+)

Expression


Co-expression Network