Gene
RNA
| Item | Value |
|---|---|
| gene id | G13196 |
| gene name | LOC106574055 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 14366290 ~ 14368501 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| rab GTPase-activating protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU15628 | False | 618 | TUCP | 0.40 | 3 | 14366290 | 14368333 |
| TU15631 | True | 213 | lncRNA | 0.44 | 2 | 14368121 | 14368501 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486121 | LOC106574050 | coding | downstream | 149835 | 14215429 ~ 14218286 (-) |
| LOC110485551 | nfia | coding | downstream | 278657 | 13784306 ~ 14089464 (-) |
| LOC110527678 | LOC106574041 | coding | downstream | 632800 | 13592909 ~ 13735321 (-) |
| LOC118939516 | LOC106574041 | coding | downstream | 782563 | 13568174 ~ 13585743 (-) |
| LOC110511200 | LOC106574043 | coding | downstream | 836931 | 13443706 ~ 13531190 (-) |
| LOC110486637 | LOC106574056 | coding | upstream | 126309 | 14494810 ~ 14529940 (-) |
| LOC110486932 | LOC106574064 | coding | upstream | 268694 | 14637195 ~ 14858563 (-) |
| LOC110487385 | LOC106574065 | coding | upstream | 587449 | 14955950 ~ 14959313 (-) |
| LOC110487509 | LOC106574066 | coding | upstream | 594898 | 14962746 ~ 14988503 (-) |
| LOC110487829 | LOC106574071 | coding | upstream | 700611 | 15069112 ~ 15070898 (-) |
| G13053 | NA | non-coding | downstream | 123730 | 14243625 ~ 14244391 (-) |
| G13013 | NA | non-coding | downstream | 180882 | 14186377 ~ 14187239 (-) |
| G12973 | NA | non-coding | downstream | 281471 | 14086412 ~ 14086650 (-) |
| G12966 | NA | non-coding | downstream | 301416 | 14066487 ~ 14066705 (-) |
| G12954 | NA | non-coding | downstream | 317554 | 14050300 ~ 14050567 (-) |
| G13251 | NA | non-coding | upstream | 57536 | 14426037 ~ 14426628 (-) |
| G13299 | NA | non-coding | upstream | 140710 | 14509211 ~ 14514499 (-) |
| G13516 | NA | non-coding | upstream | 277041 | 14645542 ~ 14646667 (-) |
| G13522 | NA | non-coding | upstream | 302591 | 14671092 ~ 14671321 (-) |
| G13523 | NA | non-coding | upstream | 306355 | 14674856 ~ 14675134 (-) |
| G13195 | fam163a | other | downstream | 18643 | 14347082 ~ 14349478 (-) |
| G13000 | NA | other | downstream | 194778 | 14141880 ~ 14173343 (-) |
| G12845 | NA | other | downstream | 502650 | 13863817 ~ 13865471 (-) |
| G12196 | NA | other | downstream | 1072668 | 13293405 ~ 13295453 (-) |
| G14120 | antithrombin | other | upstream | 797680 | 15114926 ~ 15174030 (-) |
| LOC110488330 | LOC106613586 | other | upstream | 810045 | 15175297 ~ 15183693 (-) |
| LOC110488740 | cdc14a | other | upstream | 965578 | 15325555 ~ 15394233 (-) |
| LOC110531395 | LOC106613616 | other | upstream | 1820503 | 16181514 ~ 16295527 (-) |
