G13121


Basic Information

Item Value
gene id G13121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14421405 ~ 14421630 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15544
aggagcactgccagagccctgcaaaatgacctccagcaggccacaaatgtgcatgtgtctgctcaaacggtcagaaacagactccatgagggtggtatgagggcccgatgggtagagagagaaagagacgggtagcgagagaaagagacgggtagagagagagagagacgggtagagagacagagagacgggtagagagagagaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC109523355 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15544 True 206 lncRNA 0.46 2 14421405 14421630

Neighbor

gene id symbol gene type direction distance location
gpr52 LOC106574057 coding upstream 15248 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 71778 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 117299 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 176993 14220167 ~ 14244412 (+)
LOC110486057 NA coding upstream 206466 14192456 ~ 14214939 (+)
LOC110487584 LOC106574067 coding downstream 572307 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 594508 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 602789 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 653554 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 696220 15117850 ~ 15126002 (+)
G12692 NA non-coding upstream 230590 14126330 ~ 14190815 (+)
G12680 NA non-coding upstream 322114 14099008 ~ 14099291 (+)
G12675 NA non-coding upstream 330054 14090734 ~ 14091351 (+)
G12670 NA non-coding upstream 337429 14083471 ~ 14083976 (+)
G12663 NA non-coding upstream 352719 14068471 ~ 14068686 (+)
G13334 NA non-coding downstream 147469 14569099 ~ 14571242 (+)
G13359 NA non-coding downstream 212333 14633963 ~ 14635553 (+)
G13363 NA non-coding downstream 220733 14642363 ~ 14642610 (+)
G13364 NA non-coding downstream 221100 14642730 ~ 14642996 (+)
G13365 NA non-coding downstream 221975 14643605 ~ 14643821 (+)
G12410 NA other upstream 789515 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 1161409 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 2907023 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 4260119 10140230 ~ 10162948 (+)
G13380 NA other downstream 257720 14679350 ~ 14679578 (+)
G13381 NA other downstream 258068 14679698 ~ 14680027 (+)
G13391 NA other downstream 278546 14700176 ~ 14700730 (+)
G13434 NA other downstream 390141 14811771 ~ 14812624 (+)
G13639 NA other downstream 539924 14961554 ~ 14962003 (+)

Expression


Co-expression Network