G13334


Basic Information

Item Value
gene id G13334
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14569099 ~ 14571242 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15787
cctcacagtactgtacaggaggagcgttatactatacatgttgatgagaactagaaccctcacagccctgtacagtatgagtgattatattatacatgctgatgagaactagaaccctcacagtactgtacaggaggagtgattatattatacatgttgatgagaactagaaccctcacagtactgtacaggaggagtgattatactatacatgttgatgagaactagaaccctcacagtactgtacaggaggagtgattatattatacatgttgatgagaactagaaccctcacagtactgtacaggaggagtgattatattatacatgttgatgagaactagaaccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15787 True 349 lncRNA 0.39 2 14569099 14571242

Neighbor

gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 73251 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 162942 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 219472 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 264993 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 324687 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 422695 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 444896 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 453177 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 503942 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 546608 15117850 ~ 15126002 (+)
G13121 NA non-coding upstream 147469 14421405 ~ 14421630 (+)
G12692 NA non-coding upstream 378284 14126330 ~ 14190815 (+)
G12680 NA non-coding upstream 469808 14099008 ~ 14099291 (+)
G12675 NA non-coding upstream 477748 14090734 ~ 14091351 (+)
G12670 NA non-coding upstream 485123 14083471 ~ 14083976 (+)
G13359 NA non-coding downstream 62721 14633963 ~ 14635553 (+)
G13363 NA non-coding downstream 71121 14642363 ~ 14642610 (+)
G13364 NA non-coding downstream 71488 14642730 ~ 14642996 (+)
G13365 NA non-coding downstream 72363 14643605 ~ 14643821 (+)
G13366 NA non-coding downstream 73349 14644591 ~ 14644841 (+)
LOC110486057 NA other upstream 361085 14192456 ~ 14214939 (+)
G12410 NA other upstream 937209 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 1309103 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 3054717 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 4407813 10140230 ~ 10162948 (+)
G13380 NA other downstream 108108 14679350 ~ 14679578 (+)
G13381 NA other downstream 108456 14679698 ~ 14680027 (+)
G13391 NA other downstream 128934 14700176 ~ 14700730 (+)
G13434 NA other downstream 240529 14811771 ~ 14812624 (+)
G13639 NA other downstream 390312 14961554 ~ 14962003 (+)

Expression


Co-expression Network