G13359


Basic Information

Item Value
gene id G13359
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14633963 ~ 14635553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15813
ATCCACATTAAAACCAACTAAAAATAAATTGATCTGATAACCACACCATGTTCTTCACCTTTAAAAAAAGCATTACAGGACTACAAGTACCAGAATGCATTGTGATACAAGcaggaaaacaacaacaacaatagcaAACGGCTGATTCTCTGTTTGACTGCAGAGACTGGTACCCTCGTCGCTCTAATATTTCAAGGGTCTACAATATAATTTCATTTCACATATGAATAACTTCTGCTGCCTCTTTGAAAAGTAAAGTAAGAAATAACATGGAATAAAGTCAAATATAAAAGTTGTATTTAGCTCACTTTTCTCCGAAATTTAGTTTATTTCTGCGTTCATTCGGATGTTCTCGACCAGCTGTCTGTAAATGGTCGGTCATGACCGGGGAGAGGAGTGTTCTATCACAAAGCCACAACATTACTCTCATACACTTCAGTCCCCCAGTCTTTTTTAGTGAAACGGAAAAGTCAATTTTGTAAAGCGGAAGTGCATCTGAGATTCCAAACGCCCACTGGAGTTTGTTTGGGGCCATTTCCGTCAGCTTTAAATGTACATGGAGGTCTGGCTCCCTTTCCGTCCCCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCATCACCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCATCCCCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCGTCACCTTTAAGTGTACATGGAGGTCTGGCTTCCTTAGTGTTGCACAATACATTGTCCATTCCCCTCGTGATGACAGACCCTCAGTCTCCACAATGACCCAGCGGTCAACAGCCTTAGTACTGGGACTCAGACAAGAGGACCTGACATAGCAATGGGCACGTGTCATAGAGTGAAAACCTCACATTCAGagcatgagagacagagaaagagagggggcagagaatgagacagagagagagggtagagtgaatgagagagagtgagatagaaggggttagagagaatgagagaaagagagggagagagatga
>TU15814
ATCCACATTAAAACCAACTAAAAATAAATTGATCTGATAACCACACCATGTTCTTCACCTTTAAAAAAAGCATTACAGGACTACAAGTACCAGAATGCATTGTGATACAAGcaggaaaacaacaacaacaatagcaAACGGCTGATTCTCTGTTTGACTGCAGAGACTGGTACCCTCGTCGCTCTAATATTTCAAGGGTCTACAATATAATTTCATTTCACATATGAATAACTTCTGCTGCCTCTTTGAAAAGTAAAGTAAGAAATAACATGGAATAAAGTCAAATATAAAAGTTGTATTTAGCTCACTTTTCTCCGAAATTTAGTTTATTTCTGCGTTCATTCGGATGTTCTCGACCAGCTGTCTGTAAATGGTCGGTCATGACCGGGGAGAGGAGTGTTCTATCACAAAGCCACAACATTACTCTCATACACTTCAGTCCCCCAGTCTTTTTTAGTGAAACGGAAAAGTCAATTTTGTAAAGCGGAAGTGCATCTGAGATTCCAAACGCCCACTGGAGTTTGTTTGGGGCCATTTCCGTCAGCTTTAAATGTACATGGAGGTCTGGCTCCCTTTCCGTCCCCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCATCCCCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCGTTCCCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCATCCCCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCATCACCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCGACACCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCATCCCCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCATCCCCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCTGACACCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCGACACCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCGTCACCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCGACACCTTTAAGTGTACATGGAGGTCTGGCTCCCTTTCCGTCACCTTTAAGTGTACATGGAGGTCTGGCTTCCTTAGTGTTGCACAATACATTGTCCATTCCCCTCGTGATGACAGACCCTCAGTCTCCACAATGACCCAGCGGTCAACAGCCTTAGTACTGGGACTCAGACAAGAGGACCTGACATAGCAATGGGCACGTGTCATAGAGTGAAAACCTCACATTCAGagcatgagagacagagaaagagagggggcagagaatgagacagagagagagggtagagtgaatgagagagagtgagatagaaggggttagagagaatgagagaaagagagggagagagatga

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584648

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15813 False 1006 lncRNA 0.38 2 14633963 14635553
TU15814 True 1357 lncRNA 0.55 3 14633963 14635553

Neighbor

gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 138115 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 227806 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 284336 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 329857 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 389551 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 358384 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 380585 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 388866 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 439631 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 482297 15117850 ~ 15126002 (+)
G13334 NA non-coding upstream 62721 14569099 ~ 14571242 (+)
G13121 NA non-coding upstream 212333 14421405 ~ 14421630 (+)
G12692 NA non-coding upstream 443148 14126330 ~ 14190815 (+)
G12680 NA non-coding upstream 534672 14099008 ~ 14099291 (+)
G12675 NA non-coding upstream 542612 14090734 ~ 14091351 (+)
G13363 NA non-coding downstream 6810 14642363 ~ 14642610 (+)
G13364 NA non-coding downstream 7177 14642730 ~ 14642996 (+)
G13365 NA non-coding downstream 8052 14643605 ~ 14643821 (+)
G13366 NA non-coding downstream 9038 14644591 ~ 14644841 (+)
G13370 LOC106613575 non-coding downstream 18800 14654353 ~ 14654620 (+)
LOC110486057 NA other upstream 425949 14192456 ~ 14214939 (+)
G12410 NA other upstream 1002073 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 1373967 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 3119581 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 4472677 10140230 ~ 10162948 (+)
G13380 NA other downstream 43797 14679350 ~ 14679578 (+)
G13381 NA other downstream 44145 14679698 ~ 14680027 (+)
G13391 NA other downstream 64623 14700176 ~ 14700730 (+)
G13434 NA other downstream 176218 14811771 ~ 14812624 (+)
G13639 NA other downstream 326001 14961554 ~ 14962003 (+)

Expression


Co-expression Network