G13363


Basic Information

Item Value
gene id G13363
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14642363 ~ 14642610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15819
CTGGGACAATACCAGGATCacaatattttttccatggcaaaaatgaaaacacgaagcagatctaactctttggtcctttaaaaacttGCAGTATGTAAagtattgtgttctatagcttggaaaataaatacgtGACTGGATGACagcataatgatgtttgtttccaacattaggactGTTTTCCTAAATAAGTTAAATTTGCTTCGTGTTTTGTTTGCTTGCCACAATACTAAGGAGTATCatgatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15819 True 248 lncRNA 0.43 1 14642363 14642610

Neighbor

gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 146515 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 236206 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 292736 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 338257 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 397951 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 351327 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 373528 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 381809 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 432574 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 475240 15117850 ~ 15126002 (+)
G13359 NA non-coding upstream 6810 14633963 ~ 14635553 (+)
G13334 NA non-coding upstream 71121 14569099 ~ 14571242 (+)
G13121 NA non-coding upstream 220733 14421405 ~ 14421630 (+)
G12692 NA non-coding upstream 451548 14126330 ~ 14190815 (+)
G12680 NA non-coding upstream 543072 14099008 ~ 14099291 (+)
G13364 NA non-coding downstream 120 14642730 ~ 14642996 (+)
G13365 NA non-coding downstream 995 14643605 ~ 14643821 (+)
G13366 NA non-coding downstream 1981 14644591 ~ 14644841 (+)
G13370 LOC106613575 non-coding downstream 11743 14654353 ~ 14654620 (+)
G13371 NA non-coding downstream 13165 14655775 ~ 14656365 (+)
LOC110486057 NA other upstream 434349 14192456 ~ 14214939 (+)
G12410 NA other upstream 1010473 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 1382367 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 3127981 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 4481077 10140230 ~ 10162948 (+)
G13380 NA other downstream 36740 14679350 ~ 14679578 (+)
G13381 NA other downstream 37088 14679698 ~ 14680027 (+)
G13391 NA other downstream 57566 14700176 ~ 14700730 (+)
G13434 NA other downstream 169161 14811771 ~ 14812624 (+)
G13639 NA other downstream 318944 14961554 ~ 14962003 (+)

Expression


Co-expression Network