G13375



Basic Information


Item Value
gene id G13375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14666655 ~ 14666903 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU15833
ctctatcactctctccccctctccctctatctctctctccatactttAGACTTGTAGActctctctacatcactctctctctacatctctctctctacatctctcactctacatatctctctctacatcactctctctctacatctctctcgacatctctctctctacctatatctctctctctctatccacatatatctctctctacatctctctcactctctacatctctctccctctctacatatc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU15833 True 249 lncRNA 0.39 1 14666655 14666903

Neighbor


gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 170807 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 260498 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 317028 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 362549 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 422243 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 327034 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 349235 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 357516 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 408281 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 450947 15117850 ~ 15126002 (+)
G13371 NA non-coding upstream 10290 14655775 ~ 14656365 (+)
G13370 LOC106613575 non-coding upstream 12035 14654353 ~ 14654620 (+)
G13366 NA non-coding upstream 21814 14644591 ~ 14644841 (+)
G13365 NA non-coding upstream 22834 14643605 ~ 14643821 (+)
G13364 NA non-coding upstream 23659 14642730 ~ 14642996 (+)
G13383 NA non-coding downstream 18590 14685493 ~ 14685712 (+)
G13386 NA non-coding downstream 22134 14689037 ~ 14689301 (+)
G13387 NA non-coding downstream 23185 14690088 ~ 14690289 (+)
G13389 NA non-coding downstream 26289 14693192 ~ 14694338 (+)
G13390 NA non-coding downstream 30227 14697130 ~ 14697793 (+)
LOC110486057 NA other upstream 458641 14192456 ~ 14214939 (+)
G12410 NA other upstream 1034765 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 1406659 13238613 ~ 13295452 (+)
LOC110523899 LOC106574090 other upstream 3152273 11433102 ~ 11514427 (+)
gipc3 LOC106574151 other upstream 4505369 10140230 ~ 10162948 (+)
G13380 NA other downstream 12447 14679350 ~ 14679578 (+)
G13381 NA other downstream 12795 14679698 ~ 14680027 (+)
G13391 NA other downstream 33273 14700176 ~ 14700730 (+)
G13434 NA other downstream 144868 14811771 ~ 14812624 (+)
G13639 NA other downstream 294651 14961554 ~ 14962003 (+)

Expression



Co-expression Network