G13387


Basic Information

Item Value
gene id G13387
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14690088 ~ 14690289 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15846
agcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttcctgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggaaacttgattacacacaggtggattgtatttatcatcattagtcatttaggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU15846 True 202 lncRNA 0.41 1 14690088 14690289

Neighbor

gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 194240 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 283931 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 340461 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 385982 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 445676 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 303648 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 325849 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 334130 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 384895 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 427561 15117850 ~ 15126002 (+)
G13386 NA non-coding upstream 787 14689037 ~ 14689301 (+)
G13383 NA non-coding upstream 4376 14685493 ~ 14685712 (+)
G13375 NA non-coding upstream 23185 14666655 ~ 14666903 (+)
G13371 NA non-coding upstream 33723 14655775 ~ 14656365 (+)
G13370 LOC106613575 non-coding upstream 35468 14654353 ~ 14654620 (+)
G13389 NA non-coding downstream 2903 14693192 ~ 14694338 (+)
G13390 NA non-coding downstream 6841 14697130 ~ 14697793 (+)
G13395 NA non-coding downstream 18862 14709151 ~ 14709439 (+)
G13397 NA non-coding downstream 31189 14721478 ~ 14721719 (+)
G13414 NA non-coding downstream 83848 14774137 ~ 14774452 (+)
G13381 NA other upstream 10061 14679698 ~ 14680027 (+)
G13380 NA other upstream 10510 14679350 ~ 14679578 (+)
LOC110486057 NA other upstream 482074 14192456 ~ 14214939 (+)
G12410 NA other upstream 1058198 13617059 ~ 13666871 (+)
LOC110538561 LOC106574035 other upstream 1430092 13238613 ~ 13295452 (+)
G13391 NA other downstream 9887 14700176 ~ 14700730 (+)
G13434 NA other downstream 121482 14811771 ~ 14812624 (+)
G13639 NA other downstream 271265 14961554 ~ 14962003 (+)
sass6 sass6 other downstream 769615 15447458 ~ 15468011 (+)
LOC110490510 LOC106573976 other downstream 1004752 15694810 ~ 15716774 (+)

Expression


Co-expression Network