G13395


Basic Information

Item Value
gene id G13395
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14709151 ~ 14709439 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15858
ctcgctcgctgtctctctctctcatatcagtctcctgagggaaaAGTGCAGGAGCCTTTGATCTGATCAGTGTTTTTTTTCCCCGAGGTTGAGGAATCTTGAAATGGGACGTGCTCTCCAATTAGTTTGGGTTAAATATTTCAGAGGCTACGGCAGCTATCCCTGTCTTTTCTTCTCCCTTTAGTGAGCGGCTTCCATGTTTCCATTGGTTCTCCTGCTGACACTACAGAGACAATAAAAACCCTCCTTGTAACGCGTATACTTGACTGAACGAACGGCAGCTAGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15858 True 289 lncRNA 0.49 1 14709151 14709439

Neighbor

gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 213303 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 302994 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 359524 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 405045 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 464739 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 284498 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 306699 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 314980 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 365745 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 408411 15117850 ~ 15126002 (+)
G13390 NA non-coding upstream 11358 14697130 ~ 14697793 (+)
G13389 NA non-coding upstream 14813 14693192 ~ 14694338 (+)
G13387 NA non-coding upstream 18862 14690088 ~ 14690289 (+)
G13386 NA non-coding upstream 19850 14689037 ~ 14689301 (+)
G13383 NA non-coding upstream 23439 14685493 ~ 14685712 (+)
G13397 NA non-coding downstream 12039 14721478 ~ 14721719 (+)
G13414 NA non-coding downstream 64698 14774137 ~ 14774452 (+)
G13425 NA non-coding downstream 84522 14793961 ~ 14794194 (+)
G13426 NA non-coding downstream 85059 14794498 ~ 14794874 (+)
G13428 NA non-coding downstream 87118 14796557 ~ 14796843 (+)
G13391 NA other upstream 8421 14700176 ~ 14700730 (+)
G13381 NA other upstream 29124 14679698 ~ 14680027 (+)
G13380 NA other upstream 29573 14679350 ~ 14679578 (+)
LOC110486057 NA other upstream 501137 14192456 ~ 14214939 (+)
G12410 NA other upstream 1077261 13617059 ~ 13666871 (+)
G13434 NA other downstream 102332 14811771 ~ 14812624 (+)
G13639 NA other downstream 252115 14961554 ~ 14962003 (+)
sass6 sass6 other downstream 750465 15447458 ~ 15468011 (+)
LOC110490510 LOC106573976 other downstream 985602 15694810 ~ 15716774 (+)
LOC118941201 NA other downstream 1869647 16578956 ~ 16592967 (+)

Expression


Co-expression Network