Gene
RNA
| Item | Value |
|---|---|
| gene id | G13740 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 15100294 ~ 15174760 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU16227 | True | 396 | lncRNA | 0.38 | 2 | 15100294 | 15174760 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487930 | LOC106574072 | coding | upstream | 19990 | 15075184 ~ 15080304 (+) |
| elav1 | elav1 | coding | upstream | 73759 | 15024419 ~ 15026535 (+) |
| LOC110487655 | LOC106574076 | coding | upstream | 81202 | 15016138 ~ 15019092 (+) |
| LOC110487584 | LOC106574067 | coding | upstream | 96867 | 14993937 ~ 15003427 (+) |
| gpr52 | LOC106574057 | coding | upstream | 694137 | 14400579 ~ 14406157 (+) |
| LOC110529632 | dph5 | coding | downstream | 17889 | 15192649 ~ 15241166 (+) |
| LOC110489303 | dbt | coding | downstream | 250362 | 15425122 ~ 15432764 (+) |
| LOC118966767 | NA | coding | downstream | 256749 | 15431509 ~ 15431641 (+) |
| lrrc39 | lrrc39 | coding | downstream | 258329 | 15433089 ~ 15437025 (+) |
| sass6 | sass6 | coding | downstream | 272698 | 15447458 ~ 15468011 (+) |
| G13774 | NA | non-coding | upstream | 107 | 15099934 ~ 15100187 (+) |
| G13772 | NA | non-coding | upstream | 2609 | 15097473 ~ 15097685 (+) |
| G13769 | NA | non-coding | upstream | 5118 | 15094962 ~ 15095176 (+) |
| G13768 | NA | non-coding | upstream | 5894 | 15094122 ~ 15094400 (+) |
| G13767 | NA | non-coding | upstream | 6194 | 15093836 ~ 15094100 (+) |
| G13806 | NA | non-coding | downstream | 22804 | 15197564 ~ 15197840 (+) |
| G13807 | NA | non-coding | downstream | 23372 | 15198132 ~ 15198454 (+) |
| G13820 | NA | non-coding | downstream | 50967 | 15225727 ~ 15225937 (+) |
| G13823 | NA | non-coding | downstream | 53871 | 15228631 ~ 15228879 (+) |
| G13827 | NA | non-coding | downstream | 56238 | 15230998 ~ 15231515 (+) |
| G13639 | NA | other | upstream | 138291 | 14961554 ~ 14962003 (+) |
| G13434 | NA | other | upstream | 287670 | 14811771 ~ 14812624 (+) |
| G13391 | NA | other | upstream | 399564 | 14700176 ~ 14700730 (+) |
| G13381 | NA | other | upstream | 420267 | 14679698 ~ 14680027 (+) |
| G13380 | NA | other | upstream | 420716 | 14679350 ~ 14679578 (+) |
| LOC110490510 | LOC106573976 | other | downstream | 520281 | 15694810 ~ 15716774 (+) |
| LOC118941201 | NA | other | downstream | 1404326 | 16578956 ~ 16592967 (+) |
| LOC110492606 | LOC106573909 | other | downstream | 1741739 | 16916482 ~ 16920945 (+) |
| LOC110492876 | LOC106613263 | other | downstream | 1788297 | 16962997 ~ 16967790 (+) |
