G13956


Basic Information

Item Value
gene id G13956
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 15421591 ~ 15421805 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU16496
gtaagaagcatctcaaggtcctggagtggcctagccagtctccagacctgaacccaatagaaaatctttggagggagctgaaagtccgtattgcccagcgacaaccccgaaacctgaaggatctggagaaggtctgtatggaggagtgggccaaaatccctgctgcagtgtgtgcacacctggtcaagaactacagaaaacgtatgatctctgta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU16496 True 215 lncRNA 0.39 1 15421591 15421805

Neighbor

gene id symbol gene type direction distance location
LOC110529632 dph5 coding upstream 180425 15192649 ~ 15241166 (+)
LOC110488261 antithrombin coding upstream 250176 15163316 ~ 15171415 (+)
LOC110488062 LOC106613585 coding upstream 262119 15130526 ~ 15159472 (+)
LOC110529430 LOC106574078 coding upstream 295589 15117850 ~ 15126002 (+)
LOC110487930 LOC106574072 coding upstream 341287 15075184 ~ 15080304 (+)
LOC110489303 dbt coding downstream 3317 15425122 ~ 15432764 (+)
LOC118966767 NA coding downstream 9704 15431509 ~ 15431641 (+)
lrrc39 lrrc39 coding downstream 11284 15433089 ~ 15437025 (+)
sass6 sass6 coding downstream 25653 15447458 ~ 15468011 (+)
LOC110489630 LOC106573979 coding downstream 86957 15508762 ~ 15521789 (+)
G13908 NA non-coding upstream 8346 15340394 ~ 15413245 (+)
G13907 NA non-coding upstream 78971 15342280 ~ 15342620 (+)
G13890 NA non-coding upstream 97623 15317312 ~ 15323968 (+)
G13865 NA non-coding upstream 138728 15282659 ~ 15282863 (+)
G13863 NA non-coding upstream 140171 15281162 ~ 15281420 (+)
G14359 NA non-coding downstream 106525 15528330 ~ 15528643 (+)
G14365 NA non-coding downstream 109196 15531001 ~ 15531361 (+)
G14415 NA non-coding downstream 189268 15611073 ~ 15611634 (+)
G14417 NA non-coding downstream 193500 15615305 ~ 15615517 (+)
G13639 NA other upstream 459588 14961554 ~ 14962003 (+)
G13434 NA other upstream 608967 14811771 ~ 14812624 (+)
G13391 NA other upstream 720861 14700176 ~ 14700730 (+)
G13381 NA other upstream 741564 14679698 ~ 14680027 (+)
G13380 NA other upstream 742013 14679350 ~ 14679578 (+)
LOC110490510 LOC106573976 other downstream 273236 15694810 ~ 15716774 (+)
LOC118941201 NA other downstream 1157281 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 1494694 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 1541252 16962997 ~ 16967790 (+)

Expression


Co-expression Network