G14415


Basic Information

Item Value
gene id G14415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 15611073 ~ 15611634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU17017
TCCGCCCGTATACATACTTCAGACAATCACAACTCTGTTGCCTCACTACAATGACCTTTGCCCTGACAGTGGGCCgctgcaggatgacaatgtcatTTCCTGGCGCTACACAGAGGCTCGAGTATTGCAGCTCCCACGCTCTGCGGGCCGAGCAGGTTGAGGAAGACGGGGATATCACTGCTGAACAAAAACACCAGTTCTTCAAATATGGTTAGAGTTTAGAAATATCTTGGATCAGTTATGTTCGAATAGGAGCGAGCTAAAAACCAGTTGTTATGTTTGCCTTGTGGTTTGTAGACAAGTGTTGCTAGATCAAGTGATGGAGCATGAGATCGAAGAGTTTCTGCAAACATCGAATGGGGACAAGATCAAGCCCTCCACCATCCTCTTTGTGTGGGAGTTGGC

Function

NR:

description
NACHT domain- and WD repeat-containing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17017 True 405 lncRNA 0.43 2 15611073 15611634

Neighbor

gene id symbol gene type direction distance location
LOC110489937 mepd coding upstream 4594 15595313 ~ 15606479 (+)
LOC118966758 NA coding upstream 11858 15599090 ~ 15599215 (+)
LOC118944451 NA coding upstream 55603 15552115 ~ 15555470 (+)
LOC110489630 LOC106573979 coding upstream 89284 15508762 ~ 15521789 (+)
sass6 sass6 coding upstream 143062 15447458 ~ 15468011 (+)
LOC110490377 LOC106573932 coding downstream 10884 15622518 ~ 15636224 (+)
LOC110490510 LOC106573976 coding downstream 83176 15694810 ~ 15716774 (+)
LOC110490675 LOC106573928 coding downstream 299499 15911133 ~ 15919924 (+)
cart1 LOC106573929 coding downstream 308867 15920501 ~ 15922085 (+)
LOC110490588 LOC106573927 coding downstream 310869 15922503 ~ 15975856 (+)
G14365 NA non-coding upstream 79712 15531001 ~ 15531361 (+)
G14359 NA non-coding upstream 82430 15528330 ~ 15528643 (+)
lrrc39 lrrc39 non-coding upstream 175757 15433089 ~ 15437025 (+)
G13956 NA non-coding upstream 189268 15421591 ~ 15421805 (+)
G13908 NA non-coding upstream 197828 15340394 ~ 15413245 (+)
G14417 NA non-coding downstream 3671 15615305 ~ 15615517 (+)
G14418 NA non-coding downstream 3937 15615571 ~ 15615837 (+)
G14427 NA non-coding downstream 25946 15637580 ~ 15638046 (+)
G14858 NA non-coding downstream 431748 16043382 ~ 16044075 (+)
G14888 NA non-coding downstream 476335 16087969 ~ 16097568 (+)
G13639 NA other upstream 649070 14961554 ~ 14962003 (+)
G13434 NA other upstream 798449 14811771 ~ 14812624 (+)
G13391 NA other upstream 910343 14700176 ~ 14700730 (+)
G13381 NA other upstream 931046 14679698 ~ 14680027 (+)
LOC118941201 NA other downstream 967452 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 1304865 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 1351423 16962997 ~ 16967790 (+)
LOC110495874 LOC106573877 other downstream 2042573 17654164 ~ 17673094 (+)

Expression


Co-expression Network