G15008


Basic Information

Item Value
gene id G15008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16308867 ~ 16326251 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU17655
ataagagacaagacgttgcgttttttgtaagctgttttttttctggatcaaacgcgctttataaatggacattttggatatatatggacggaattaatcgaacaaaaggaccaattgtgatgtttatgggacatattggagtgccaacaaaagaagcttgtcaaaggtaatgcatgttttatattttatttcagcgttttgtgtagcgcctgcagggttgaaatatgctaactcctttgtttactgctggtgcagatggtgcaggctatcagataatagctt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17655 True 282 lncRNA 0.41 2 16308867 16326251

Neighbor

gene id symbol gene type direction distance location
LOC110491417 LOC106573922 coding upstream 127885 16157932 ~ 16180982 (+)
LOC110490588 LOC106573927 coding upstream 333011 15922503 ~ 15975856 (+)
cart1 LOC106573929 coding upstream 386782 15920501 ~ 15922085 (+)
LOC110490675 LOC106573928 coding upstream 388943 15911133 ~ 15919924 (+)
LOC110490510 LOC106573976 coding upstream 592093 15694810 ~ 15716774 (+)
LOC110491555 LOC106573918 coding downstream 153729 16479980 ~ 16488940 (+)
LOC118941197 NA coding downstream 229241 16555492 ~ 16562184 (+)
LOC118941201 NA coding downstream 252705 16578956 ~ 16592967 (+)
LOC118941290 NA coding downstream 286349 16612600 ~ 16624198 (+)
LOC118941333 NA coding downstream 345985 16672236 ~ 16678840 (+)
G14932 NA non-coding upstream 123318 16185217 ~ 16185549 (+)
G14897 NA non-coding upstream 184116 16114813 ~ 16124751 (+)
G14888 NA non-coding upstream 211299 16087969 ~ 16097568 (+)
G14858 NA non-coding upstream 264792 16043382 ~ 16044075 (+)
G14427 NA non-coding upstream 670821 15637580 ~ 15638046 (+)
G15304 NA non-coding downstream 34250 16360501 ~ 16360854 (+)
G15326 NA non-coding downstream 48071 16374322 ~ 16374783 (+)
G15342 NA non-coding downstream 58340 16384591 ~ 16385103 (+)
G15345 NA non-coding downstream 61445 16387696 ~ 16387938 (+)
G15350 NA non-coding downstream 65935 16392186 ~ 16392401 (+)
sass6 sass6 other upstream 840879 15447458 ~ 15468011 (+)
G13639 NA other upstream 1346864 14961554 ~ 14962003 (+)
G13434 NA other upstream 1496243 14811771 ~ 14812624 (+)
G13391 NA other upstream 1608137 14700176 ~ 14700730 (+)
LOC110492606 LOC106573909 other downstream 590248 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 636806 16962997 ~ 16967790 (+)
LOC110495874 LOC106573877 other downstream 1327956 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1649713 17975918 ~ 17991176 (+)

Expression


Co-expression Network