G15342


Basic Information

Item Value
gene id G15342
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16384591 ~ 16385103 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18012
ttatctttatttaactagttaggaacaaattcttattttcaatgatggcctaggaaaagtgggttaactgcctgttcaggggcagaacgacagatttgtaccttgtcagctcggggatttgaacttgcaacctttcggttactagtccaacgctctaaccactaggctaccctgccaccccaaatgaCAGACTACAAAGGAGAAACAAGTGACAACAGTCTACCCAGTCACAATGAGACCTGTACTTTACTGGTGCAAAGAGGTCACAGGTCACGATCAACCAAAGCCAAACAAAACAGATGATACATTAGACCCTACATGGGGTTCAATACAGTTGATAACCATATGGATTAGCATGTAGGCATGCATTACTGTGAGGAGTTAGGATTTGTGACAATATAATGGCAGGATTCCTCAACAGGACCAGAGTGTGATGTAATAAAGAGAACATTATGTGATGCATACTTTGTCTGCTCTCCCCTTTTATAAAGCAACAACTCTAAACCAGGGCTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18012 True 513 lncRNA 0.51 1 16384591 16385103

Neighbor

gene id symbol gene type direction distance location
LOC110491417 LOC106573922 coding upstream 203609 16157932 ~ 16180982 (+)
LOC110490588 LOC106573927 coding upstream 408735 15922503 ~ 15975856 (+)
cart1 LOC106573929 coding upstream 462506 15920501 ~ 15922085 (+)
LOC110490675 LOC106573928 coding upstream 464667 15911133 ~ 15919924 (+)
LOC110490510 LOC106573976 coding upstream 667817 15694810 ~ 15716774 (+)
LOC110491555 LOC106573918 coding downstream 94877 16479980 ~ 16488940 (+)
LOC118941197 NA coding downstream 170389 16555492 ~ 16562184 (+)
LOC118941201 NA coding downstream 193853 16578956 ~ 16592967 (+)
LOC118941290 NA coding downstream 227497 16612600 ~ 16624198 (+)
LOC118941333 NA coding downstream 287133 16672236 ~ 16678840 (+)
G15326 NA non-coding upstream 9808 16374322 ~ 16374783 (+)
G15304 NA non-coding upstream 23737 16360501 ~ 16360854 (+)
G15008 NA non-coding upstream 58340 16308867 ~ 16326251 (+)
G14932 NA non-coding upstream 199042 16185217 ~ 16185549 (+)
G14897 NA non-coding upstream 259840 16114813 ~ 16124751 (+)
G15345 NA non-coding downstream 2593 16387696 ~ 16387938 (+)
G15350 NA non-coding downstream 7083 16392186 ~ 16392401 (+)
G15357 NA non-coding downstream 14508 16399611 ~ 16399870 (+)
G15365 NA non-coding downstream 19764 16404867 ~ 16405157 (+)
G15368 NA non-coding downstream 21498 16406601 ~ 16407400 (+)
sass6 sass6 other upstream 916603 15447458 ~ 15468011 (+)
G13639 NA other upstream 1422588 14961554 ~ 14962003 (+)
G13434 NA other upstream 1571967 14811771 ~ 14812624 (+)
G13391 NA other upstream 1683861 14700176 ~ 14700730 (+)
LOC110492606 LOC106573909 other downstream 531396 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 577954 16962997 ~ 16967790 (+)
LOC110495874 LOC106573877 other downstream 1269104 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1590861 17975918 ~ 17991176 (+)

Expression


Co-expression Network