G15368


Basic Information

Item Value
gene id G15368
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16406601 ~ 16407400 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18038
tgcaatatgtgccatgtaaaaaagctaacgtttaagttccttgctcagaacatgagaacatatgaaagctggtggttccttttaacaggagtcttcaatattcccaggtaagaagttttaggttgtagttataggatttataggacaatttctctctatacgatttgtatttcatacctttgactattggatgttcttataggcactttagtattgccagtgtaacagcatagtttccgtccctctcctcgcccctacctgggctcgaaccaggaacacatcgtcaacagccaccctcgaagcagcgttacccatcgctccacaaaagccgcggcccttgcagagcaaggggatcAATTaatccaagtctcagagcgagtgacgtttgaaacgctattagtgcacaccccgctaactagctagccatttcacatcggttacaccagcctaatctcgggagttgataggcttgaagtcataaacagctcaatgcttgaagcacagcgacgagctgctggcaaaacgcacgaaagtgctgtttgaatgaatgcttacgagcctgctggtgcctaccatcgctcagtcagactgctctatcaaatcatagacttaattataacataacacacagaaatacgagccataggtcattaatatggtcgaatccggaaaatatcatctcgaaaacaagacgtttattctgtcagtgaaatacggaaccgttccgtatgttatctaacgggtggcatccataagtctaaatattcctgttacattgcacaaccttcaatgtgtCATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18038 True 800 lncRNA 0.32 1 16406601 16407400

Neighbor

gene id symbol gene type direction distance location
LOC110491417 LOC106573922 coding upstream 225619 16157932 ~ 16180982 (+)
LOC110490588 LOC106573927 coding upstream 430745 15922503 ~ 15975856 (+)
cart1 LOC106573929 coding upstream 484516 15920501 ~ 15922085 (+)
LOC110490675 LOC106573928 coding upstream 486677 15911133 ~ 15919924 (+)
LOC110490510 LOC106573976 coding upstream 689827 15694810 ~ 15716774 (+)
LOC110491555 LOC106573918 coding downstream 72580 16479980 ~ 16488940 (+)
LOC118941197 NA coding downstream 148092 16555492 ~ 16562184 (+)
LOC118941201 NA coding downstream 171556 16578956 ~ 16592967 (+)
LOC118941290 NA coding downstream 205200 16612600 ~ 16624198 (+)
LOC118941333 NA coding downstream 264836 16672236 ~ 16678840 (+)
G15365 NA non-coding upstream 1444 16404867 ~ 16405157 (+)
G15357 NA non-coding upstream 6731 16399611 ~ 16399870 (+)
G15350 NA non-coding upstream 14200 16392186 ~ 16392401 (+)
G15345 NA non-coding upstream 18663 16387696 ~ 16387938 (+)
G15342 NA non-coding upstream 21498 16384591 ~ 16385103 (+)
G15374 NA non-coding downstream 9821 16417221 ~ 16417428 (+)
G15372 NA non-coding downstream 11005 16418405 ~ 16419019 (+)
G15384 NA non-coding downstream 32423 16439823 ~ 16440035 (+)
G15391 LOC106581772 non-coding downstream 105026 16512426 ~ 16512653 (+)
G15416 NA non-coding downstream 197704 16605104 ~ 16725738 (+)
sass6 sass6 other upstream 938613 15447458 ~ 15468011 (+)
G13639 NA other upstream 1444598 14961554 ~ 14962003 (+)
G13434 NA other upstream 1593977 14811771 ~ 14812624 (+)
G13391 NA other upstream 1705871 14700176 ~ 14700730 (+)
LOC110492606 LOC106573909 other downstream 509099 16916482 ~ 16920945 (+)
LOC110492876 LOC106613263 other downstream 555657 16962997 ~ 16967790 (+)
LOC110495874 LOC106573877 other downstream 1246807 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1568564 17975918 ~ 17991176 (+)

Expression


Co-expression Network