G15502


Basic Information

Item Value
gene id G15502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16762949 ~ 16763209 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18197
gtttatggttcattgaacaagcatgggaaacagtgtttaaaccctttacaatgaagatctgtgaagttatttggatttttatgaattatctttgaaagacaggttcctgaaaaagggacatttctttttttgctgagtttatgtactgaacaaaaatataaatgtagggcctcctgggtggcgcagtggttacgggctgtgccaccagagactctgggttcgcgcccaggctctgtcgcaaccggccgtgaccgggaggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18197 True 261 lncRNA 0.50 1 16762949 16763209

Neighbor

gene id symbol gene type direction distance location
LOC118941434 NA coding upstream 11495 16730401 ~ 16751454 (+)
LOC110491738 NA coding upstream 53264 16695732 ~ 16709685 (+)
LOC118941333 NA coding upstream 84109 16672236 ~ 16678840 (+)
LOC118941290 NA coding upstream 138751 16612600 ~ 16624198 (+)
LOC118941201 NA coding upstream 169982 16578956 ~ 16592967 (+)
LOC100135798 LOC100135798 coding downstream 62811 16826020 ~ 16827539 (+)
ddx49 ddx49 coding downstream 112487 16875696 ~ 16885634 (+)
LOC110492606 LOC106573909 coding downstream 153273 16916482 ~ 16920945 (+)
LOC110492686 LOC106573907 coding downstream 170179 16933335 ~ 16935884 (+)
LOC110492876 LOC106613263 coding downstream 199788 16962997 ~ 16967790 (+)
G15438 NA non-coding upstream 14169 16743848 ~ 16748780 (+)
G15416 NA non-coding upstream 37211 16605104 ~ 16725738 (+)
G15421 NA non-coding upstream 37371 16723873 ~ 16725578 (+)
G15418 NA non-coding upstream 148295 16613574 ~ 16614654 (+)
G15391 LOC106581772 non-coding upstream 250296 16512426 ~ 16512653 (+)
G15519 NA non-coding downstream 17130 16780339 ~ 16780597 (+)
G15536 NA non-coding downstream 33114 16796323 ~ 16796597 (+)
G15538 NA non-coding downstream 34103 16797312 ~ 16797600 (+)
G15552 NA non-coding downstream 70661 16833870 ~ 16834176 (+)
G15563 NA non-coding downstream 91976 16855185 ~ 16855466 (+)
LOC110490510 LOC106573976 other upstream 1047267 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1294961 15447458 ~ 15468011 (+)
G13639 NA other upstream 1800946 14961554 ~ 14962003 (+)
G13434 NA other upstream 1950325 14811771 ~ 14812624 (+)
LOC110495874 LOC106573877 other downstream 890998 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1212755 17975918 ~ 17991176 (+)
G17420 NA other downstream 2119514 18882723 ~ 18956208 (+)

Expression


Co-expression Network