G15519


Basic Information

Item Value
gene id G15519
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16780339 ~ 16780597 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18215
caattattttatcatcaatttctctcagccaatcattagTCATTTGTGTAAGGGCTGTGGTTGTTGAATGCCCTTCCCTATAATTGTGCTGAGTCTGTTGtgaatttgtttactgtaaaatagcattgtatctggccaaacaccattttttcaaaatgtttattaAAGCTGATGaagtcacattttatttgtcatatgctccaaatacaacaggttaACAACCTTATGTGAAATGCTTAccttcaagcccttaaccaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18215 True 259 lncRNA 0.39 1 16780339 16780597

Neighbor

gene id symbol gene type direction distance location
LOC118941434 NA coding upstream 28885 16730401 ~ 16751454 (+)
LOC110491738 NA coding upstream 70654 16695732 ~ 16709685 (+)
LOC118941333 NA coding upstream 101499 16672236 ~ 16678840 (+)
LOC118941290 NA coding upstream 156141 16612600 ~ 16624198 (+)
LOC118941201 NA coding upstream 187372 16578956 ~ 16592967 (+)
LOC100135798 LOC100135798 coding downstream 45423 16826020 ~ 16827539 (+)
ddx49 ddx49 coding downstream 95099 16875696 ~ 16885634 (+)
LOC110492606 LOC106573909 coding downstream 135885 16916482 ~ 16920945 (+)
LOC110492686 LOC106573907 coding downstream 152791 16933335 ~ 16935884 (+)
LOC110492876 LOC106613263 coding downstream 182400 16962997 ~ 16967790 (+)
G15502 NA non-coding upstream 17130 16762949 ~ 16763209 (+)
G15438 NA non-coding upstream 31559 16743848 ~ 16748780 (+)
G15416 NA non-coding upstream 54601 16605104 ~ 16725738 (+)
G15421 NA non-coding upstream 54761 16723873 ~ 16725578 (+)
G15418 NA non-coding upstream 165685 16613574 ~ 16614654 (+)
G15536 NA non-coding downstream 15726 16796323 ~ 16796597 (+)
G15538 NA non-coding downstream 16715 16797312 ~ 16797600 (+)
G15552 NA non-coding downstream 53273 16833870 ~ 16834176 (+)
G15563 NA non-coding downstream 74588 16855185 ~ 16855466 (+)
G15564 NA non-coding downstream 74878 16855475 ~ 16855706 (+)
LOC110490510 LOC106573976 other upstream 1064657 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1312351 15447458 ~ 15468011 (+)
G13639 NA other upstream 1818336 14961554 ~ 14962003 (+)
G13434 NA other upstream 1967715 14811771 ~ 14812624 (+)
LOC110495874 LOC106573877 other downstream 873610 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1195367 17975918 ~ 17991176 (+)
G17420 NA other downstream 2102126 18882723 ~ 18956208 (+)

Expression


Co-expression Network