G15552


Basic Information

Item Value
gene id G15552
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16833870 ~ 16834176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18250
gttcaagggggccgaatactttcgcaaggcactgtacatactcaaaccaaaagccatggagtacaggcaacatctgcactgagctaaagggtagagctgccgctttcaaggagtgggactctaacccggaagcttatatgaaatcccgctatgccgtccgacgaaccatcaaacaggcaaagcgtcaatacaggactaagattgaatcgtaccaCACCGGCTCCTACccttgttggatgtggcagggcttgcaaactattacggactacaaagggaagcactgcCACGAGCTGCCCACTATCACGAg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18250 True 307 lncRNA 0.46 1 16833870 16834176

Neighbor

gene id symbol gene type direction distance location
LOC100135798 LOC100135798 coding upstream 6331 16826020 ~ 16827539 (+)
LOC118941434 NA coding upstream 82416 16730401 ~ 16751454 (+)
LOC110491738 NA coding upstream 124185 16695732 ~ 16709685 (+)
LOC118941333 NA coding upstream 155030 16672236 ~ 16678840 (+)
LOC118941290 NA coding upstream 209672 16612600 ~ 16624198 (+)
ddx49 ddx49 coding downstream 41520 16875696 ~ 16885634 (+)
LOC110492606 LOC106573909 coding downstream 82306 16916482 ~ 16920945 (+)
LOC110492686 LOC106573907 coding downstream 99212 16933335 ~ 16935884 (+)
LOC110492876 LOC106613263 coding downstream 128821 16962997 ~ 16967790 (+)
LOC110493012 NA coding downstream 142691 16976867 ~ 16980827 (+)
G15538 NA non-coding upstream 36270 16797312 ~ 16797600 (+)
G15536 NA non-coding upstream 37273 16796323 ~ 16796597 (+)
G15519 NA non-coding upstream 53273 16780339 ~ 16780597 (+)
G15502 NA non-coding upstream 70661 16762949 ~ 16763209 (+)
G15438 NA non-coding upstream 85090 16743848 ~ 16748780 (+)
G15563 NA non-coding downstream 21009 16855185 ~ 16855466 (+)
G15564 NA non-coding downstream 21299 16855475 ~ 16855706 (+)
G15630 NA non-coding downstream 39853 16874029 ~ 16874252 (+)
G15655 NA non-coding downstream 70943 16905119 ~ 16905322 (+)
G15672 NA non-coding downstream 73994 16908170 ~ 16908425 (+)
LOC118941201 NA other upstream 252988 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1118188 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1365882 15447458 ~ 15468011 (+)
G13639 NA other upstream 1871867 14961554 ~ 14962003 (+)
G13434 NA other upstream 2021246 14811771 ~ 14812624 (+)
LOC110495874 LOC106573877 other downstream 820031 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1141788 17975918 ~ 17991176 (+)
G17420 NA other downstream 2048547 18882723 ~ 18956208 (+)

Expression


Co-expression Network