G15564


Basic Information

Item Value
gene id G15564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16855475 ~ 16855706 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18262
tgtcgtctgcaaacttgatgattgagttggaggcgtgcatggccacgcagtcatgggtgaacagggagtaaaggagagggctgagaacacacccttgtgggttcccactgttgaggatcagcggggtggagatgtttcctaccctcaccacctgggggcgtcctgtcagaaagtccaggacccagttgcacagggcggggttgagacccagggtctcaagcttaatgacgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU18262 True 232 lncRNA 0.49 1 16855475 16855706

Neighbor

gene id symbol gene type direction distance location
LOC100135798 LOC100135798 coding upstream 27936 16826020 ~ 16827539 (+)
LOC118941434 NA coding upstream 104021 16730401 ~ 16751454 (+)
LOC110491738 NA coding upstream 145790 16695732 ~ 16709685 (+)
LOC118941333 NA coding upstream 176635 16672236 ~ 16678840 (+)
LOC118941290 NA coding upstream 231277 16612600 ~ 16624198 (+)
ddx49 ddx49 coding downstream 19990 16875696 ~ 16885634 (+)
LOC110492606 LOC106573909 coding downstream 60776 16916482 ~ 16920945 (+)
LOC110492686 LOC106573907 coding downstream 77682 16933335 ~ 16935884 (+)
LOC110492876 LOC106613263 coding downstream 107291 16962997 ~ 16967790 (+)
LOC110493012 NA coding downstream 121161 16976867 ~ 16980827 (+)
G15563 NA non-coding upstream 9 16855185 ~ 16855466 (+)
G15552 NA non-coding upstream 21299 16833870 ~ 16834176 (+)
G15538 NA non-coding upstream 57875 16797312 ~ 16797600 (+)
G15536 NA non-coding upstream 58878 16796323 ~ 16796597 (+)
G15519 NA non-coding upstream 74878 16780339 ~ 16780597 (+)
G15630 NA non-coding downstream 18323 16874029 ~ 16874252 (+)
G15655 NA non-coding downstream 49413 16905119 ~ 16905322 (+)
G15672 NA non-coding downstream 52464 16908170 ~ 16908425 (+)
G15692 NA non-coding downstream 74411 16930117 ~ 16930353 (+)
LOC118941201 NA other upstream 274593 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1139793 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1387487 15447458 ~ 15468011 (+)
G13639 NA other upstream 1893472 14961554 ~ 14962003 (+)
G13434 NA other upstream 2042851 14811771 ~ 14812624 (+)
LOC110495874 LOC106573877 other downstream 798501 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1120258 17975918 ~ 17991176 (+)
G17420 NA other downstream 2027017 18882723 ~ 18956208 (+)

Expression


Co-expression Network