G15692


Basic Information

Item Value
gene id G15692
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16930117 ~ 16930353 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18409
cccctatagaaatggtagtctgtcaggtactcaacaggaaggtctgatttacctattattaaaacaagacccagatggcaaatataaagacccaGTCTATCTAAACCACTGGAGGCCCcatacacttcaatgttgtgatgcaaaaatactagcaaaatgcatagcattCAGAATTTAAAGGGTTTTACCAGTTATTGTTCATCCTGAGCAGACaggttttttttacatggacaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18409 True 237 lncRNA 0.43 1 16930117 16930353

Neighbor

gene id symbol gene type direction distance location
LOC110492606 LOC106573909 coding upstream 9172 16916482 ~ 16920945 (+)
ddx49 ddx49 coding upstream 44483 16875696 ~ 16885634 (+)
LOC100135798 LOC100135798 coding upstream 102578 16826020 ~ 16827539 (+)
LOC118941434 NA coding upstream 178663 16730401 ~ 16751454 (+)
LOC110491738 NA coding upstream 220432 16695732 ~ 16709685 (+)
LOC110492686 LOC106573907 coding downstream 3035 16933335 ~ 16935884 (+)
LOC110492876 LOC106613263 coding downstream 32644 16962997 ~ 16967790 (+)
LOC110493012 NA coding downstream 46514 16976867 ~ 16980827 (+)
LOC110493316 LOC106573897 coding downstream 52156 16982509 ~ 17136370 (+)
LOC110493709 LOC106573901 coding downstream 314000 17244353 ~ 17256260 (+)
G15672 NA non-coding upstream 21692 16908170 ~ 16908425 (+)
G15655 NA non-coding upstream 24795 16905119 ~ 16905322 (+)
G15630 NA non-coding upstream 55865 16874029 ~ 16874252 (+)
G15564 NA non-coding upstream 74411 16855475 ~ 16855706 (+)
G15563 NA non-coding upstream 74651 16855185 ~ 16855466 (+)
G15701 NA non-coding downstream 7183 16937536 ~ 16938307 (+)
G15702 NA non-coding downstream 14296 16944649 ~ 16945594 (+)
G15705 NA non-coding downstream 20032 16950385 ~ 16950971 (+)
G15706 rab3a non-coding downstream 21954 16952307 ~ 16952527 (+)
LOC118941201 NA other upstream 349235 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1214435 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1462129 15447458 ~ 15468011 (+)
G13639 NA other upstream 1968114 14961554 ~ 14962003 (+)
LOC110495874 LOC106573877 other downstream 723854 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1045611 17975918 ~ 17991176 (+)
G17420 NA other downstream 1952370 18882723 ~ 18956208 (+)
G18481 NA other downstream 2634496 19564849 ~ 19565221 (+)

Expression


Co-expression Network