G15705



Basic Information


Item Value
gene id G15705
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16950385 ~ 16950971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU18422
ACCAGTCCTGCACAGCGTTAAAGGACTCCTCATTGGTGATGTCATACATGAGGATGAAGCCCATGGCTCCGCGGTAGTAAGCGGTGGTGATAGTCCTGTACCTCTCCTGCCCTGCCGTATCCTAGAAACAtgacacgcgcacgcacacacacacacacacacacacgttgcatTACAATGAACACCACAGTTAAATTGACATGCACACCAATCATCTTGCACACCGATAACGACAGAACATTAAAACCCTCCAGTGATATCAAACAGTCTAGCGGAAGACTACTTTTGCTGCCAATTGATGATGATTGCACATCAGTAGCTTTTAGAGACCCTTTCGCATTTCCGCTGTGACTTGCCAAATATCTATTCCCCTCCTTGGTTGGCATGTCAGAAGGGGCAGATTGAGTTACGACCTAAGCTCTAATGAATGCTCATGGAATGAATTAGGCCTCCCTGATACCCAATACTACACCTCTCTGAGCTGTGGCGCAACATCAGCCTCTATCCCCATTACAGATGACAAAACTCGGCTGGTTAGGCTGTATGTTAGGTTTAGGCTGCACGTTATCTGTTAAAAAAAGTCACAT

Function


NR:

description
PREDICTED: ras-related protein Rab-3B-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU18422 True 587 lncRNA 0.40 1 16950385 16950971

Neighbor


gene id symbol gene type direction distance location
LOC110492686 LOC106573907 coding upstream 14501 16933335 ~ 16935884 (+)
LOC110492606 LOC106573909 coding upstream 29440 16916482 ~ 16920945 (+)
ddx49 ddx49 coding upstream 64751 16875696 ~ 16885634 (+)
LOC100135798 LOC100135798 coding upstream 122846 16826020 ~ 16827539 (+)
LOC118941434 NA coding upstream 198931 16730401 ~ 16751454 (+)
LOC110492876 LOC106613263 coding downstream 12026 16962997 ~ 16967790 (+)
LOC110493012 NA coding downstream 25896 16976867 ~ 16980827 (+)
LOC110493316 LOC106573897 coding downstream 31538 16982509 ~ 17136370 (+)
LOC110493709 LOC106573901 coding downstream 293382 17244353 ~ 17256260 (+)
klhl26 LOC106573902 coding downstream 312982 17263953 ~ 17272050 (+)
G15702 NA non-coding upstream 4791 16944649 ~ 16945594 (+)
G15701 NA non-coding upstream 12078 16937536 ~ 16938307 (+)
G15692 NA non-coding upstream 20032 16930117 ~ 16930353 (+)
G15672 NA non-coding upstream 41960 16908170 ~ 16908425 (+)
G15706 rab3a non-coding downstream 1336 16952307 ~ 16952527 (+)
G15708 NA non-coding downstream 5219 16956190 ~ 16956460 (+)
G15717 NA non-coding downstream 18934 16969905 ~ 16970223 (+)
G15743 NA non-coding downstream 22170 16973141 ~ 16973368 (+)
LOC118941201 NA other upstream 369503 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1234703 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1482397 15447458 ~ 15468011 (+)
G13639 NA other upstream 1988382 14961554 ~ 14962003 (+)
LOC110495874 LOC106573877 other downstream 703236 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1024993 17975918 ~ 17991176 (+)
G17420 NA other downstream 1931752 18882723 ~ 18956208 (+)
G18481 NA other downstream 2613878 19564849 ~ 19565221 (+)

Expression



Co-expression Network