G15743


Basic Information

Item Value
gene id G15743
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 16973141 ~ 16973368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18462
gtccatcagtaaatagcccacccaatctacctacctcattccccatattgttttaatttactttACTGCTCTTTTGCAcgccagtatcactacttacacaccatcatctgctcatcatcatctgctcatctatcactccagtgttaatctgctaaattgtaattactttgctactatggcctatttattgccttacctcctcatgccatttgcacacaatggatatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18462 True 228 lncRNA 0.35 1 16973141 16973368

Neighbor

gene id symbol gene type direction distance location
LOC110492876 LOC106613263 coding upstream 7284 16962997 ~ 16967790 (+)
LOC110492686 LOC106573907 coding upstream 37257 16933335 ~ 16935884 (+)
LOC110492606 LOC106573909 coding upstream 52196 16916482 ~ 16920945 (+)
ddx49 ddx49 coding upstream 87507 16875696 ~ 16885634 (+)
LOC100135798 LOC100135798 coding upstream 145602 16826020 ~ 16827539 (+)
LOC110493012 NA coding downstream 3499 16976867 ~ 16980827 (+)
LOC110493316 LOC106573897 coding downstream 9141 16982509 ~ 17136370 (+)
LOC110493709 LOC106573901 coding downstream 270985 17244353 ~ 17256260 (+)
klhl26 LOC106573902 coding downstream 290585 17263953 ~ 17272050 (+)
LOC110494078 LOC106573895 coding downstream 300232 17273600 ~ 17313926 (+)
G15717 NA non-coding upstream 2918 16969905 ~ 16970223 (+)
G15708 NA non-coding upstream 16681 16956190 ~ 16956460 (+)
G15706 rab3a non-coding upstream 20614 16952307 ~ 16952527 (+)
G15705 NA non-coding upstream 22170 16950385 ~ 16950971 (+)
G15702 NA non-coding upstream 27547 16944649 ~ 16945594 (+)
G15891 NA non-coding downstream 267023 17240391 ~ 17240617 (+)
G15865 NA non-coding downstream 284060 17257428 ~ 17257827 (+)
G15928 NA non-coding downstream 341198 17314566 ~ 17314970 (+)
LOC118941201 NA other upstream 392259 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1257459 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1505153 15447458 ~ 15468011 (+)
LOC110495874 LOC106573877 other downstream 680839 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 1002596 17975918 ~ 17991176 (+)
G17420 NA other downstream 1909355 18882723 ~ 18956208 (+)
G18481 NA other downstream 2591481 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 2595417 19568684 ~ 19575028 (+)

Expression


Co-expression Network