G15891


Basic Information

Item Value
gene id G15891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 17240391 ~ 17240617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18638
gttgcgactccaccttgtccATGTACTGTCTtctttgattgccttgcggagggaatagctacactgtttatattcagacatattcccagacctctttccatagTTAAATGGGGTggatcgcgctttcagttttgtgcgaatgccgccatccatccacggtttctggttcgggaaggttttaatagtctcagcgggtacaacatctccaatgcactccTTTATAAatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18638 True 227 lncRNA 0.48 1 17240391 17240617

Neighbor

gene id symbol gene type direction distance location
LOC110493316 LOC106573897 coding upstream 104026 16982509 ~ 17136370 (+)
LOC110493012 NA coding upstream 259564 16976867 ~ 16980827 (+)
LOC110492876 LOC106613263 coding upstream 274534 16962997 ~ 16967790 (+)
LOC110492686 LOC106573907 coding upstream 304507 16933335 ~ 16935884 (+)
LOC110492606 LOC106573909 coding upstream 319446 16916482 ~ 16920945 (+)
LOC110493709 LOC106573901 coding downstream 3736 17244353 ~ 17256260 (+)
klhl26 LOC106573902 coding downstream 23336 17263953 ~ 17272050 (+)
LOC110494078 LOC106573895 coding downstream 32983 17273600 ~ 17313926 (+)
smim7 LOC106573893 coding downstream 103765 17344382 ~ 17347870 (+)
LOC110494277 LOC106573893 coding downstream 107831 17348448 ~ 17356979 (+)
G15743 NA non-coding upstream 267023 16973141 ~ 16973368 (+)
G15717 NA non-coding upstream 270168 16969905 ~ 16970223 (+)
G15708 NA non-coding upstream 283931 16956190 ~ 16956460 (+)
G15706 rab3a non-coding upstream 287864 16952307 ~ 16952527 (+)
G15865 NA non-coding downstream 16811 17257428 ~ 17257827 (+)
G15928 NA non-coding downstream 73949 17314566 ~ 17314970 (+)
LOC118941201 NA other upstream 659509 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1524709 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1772403 15447458 ~ 15468011 (+)
LOC110495874 LOC106573877 other downstream 413590 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 735347 17975918 ~ 17991176 (+)
G17420 NA other downstream 1642106 18882723 ~ 18956208 (+)
G18481 NA other downstream 2324232 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 2328168 19568684 ~ 19575028 (+)

Expression


Co-expression Network