G16161 (LOC106573901)


Basic Information

Item Value
gene id G16161
gene name LOC106573901
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 17255236 ~ 17257241 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18952
CACGTCAATGCAAACTATTTACATCTACAGTAATAATCTGTCAATGAATTATCCTGGTCATTTGAACAGGCAAAGTGCTAAACGGCCCAGCCAGGCCACCGTCACAGGCCCTAGCAgtattggtaacactttacttaaagTCTGTAGATCTAATTCTTTATAAGTTGTTATGAACATGTATGAATatgtccttcctgtttggccctgtccgggggtgtcctcggatggggccacagtgtctcctgacccctcctgtctcagcctccagtatttatgctgcagtagtttatgtgtcggggggctagggtcagtttgttatatctggagtacttctcctgtcctattcggtgtcctgtgtgaatctaagtgtgcgttctctaattctctccttctctctttctttctctctctcggaggacctgagccctaggaccatgccccaggactacctgacataatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatatgctctctttaattctctctttctttctctctctcggagaacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctaaccatgctgctgctccagtttcaactgttctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccatgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaataaatttgatttgatttgatttggacctTTTATAATGTGTTATTGTAAGGATTATTATAAACCTGGtcgttcaagccctgaatgctgattggctgaaaaccACGGGCATGACACAAAattacttgtttactgttctaattatcttagtaaccagtttataatagcaataaggcacctcaggggtttgtggtatatggccaatgtaccaTAGCTAAGGGTGCTGTGTTATGCctaagaacagctcttagccatggtattggccatataccacatcccctcgggccttattgcttacttatattatgtcatgtttctcAACTGACTCAAAATGGCTGTTATTTACTCAGGATCAATAGGAAACTACAATACACCATGTTAAGGGGGTCTTGCATGATTAAGTTATGACAAGTCTTATAATGCACCATAATGCATTTTAATTACAGTCTTTAAGTAAGTGCTACCGCAGTGATGTCTACAGTGGCGTCCCGACATCCTCGGTGGAGTCTGCCTTCATATCAAAGACCAGACCGTTCCTATACATCAGCATGGTGACTTCACAGTCAATCTCTCCTTGGCTTGGATCGGCGGTTTCTAAACTTAACACCTGGCCCTTAAAATCAGAGGTCAGTGGGTCACTGACTCCATCTGGTGTGCTGGAGTCTCCAAGGCTCTTCTCGTTCTCGTCTTCACACACCTCCAGGAGAGTGGCTTCCTCAGGGTTGGGATCTTGGCTGCTCTTGTCATGTAGCTGCAGCTCATGCACCTCTTCCTTAATCTCATACATGTCCTGTTGAGACCAAGTCATTCCAATTCAAGACCAAATCCTGACTTGAGATGCCCCAAGTTCACCAGAACTCTGGCTACACAGGTTCGAAGGGACTCGAACAGTCAGGCAAATGTCTCAATGATAACAGTATCAGTACATGCCTTGGACAAAAGGTTCAAGTTAGTTACGCTTTACAAG

Function

NR:

description
interleukin-6 receptor subunit beta-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18952 True 2006 TUCP 0.45 1 17255236 17257241

Neighbor

gene id symbol gene type direction distance location
LOC110493215 LOC106573896 coding downstream 34279 17173402 ~ 17220957 (-)
LOC110493506 LOC106573900 coding downstream 82029 17140522 ~ 17173207 (-)
LOC110493631 LOC106573903 coding downstream 114844 17137016 ~ 17140392 (-)
rab3ab LOC106573906 coding downstream 294159 16943579 ~ 16961077 (-)
LOC110492528 LOC106573908 coding downstream 338800 16909202 ~ 16916436 (-)
comp LOC106573894 coding upstream 57243 17314484 ~ 17326759 (-)
LOC110494221 LOC100194656 coding upstream 72686 17329927 ~ 17343550 (-)
LOC118942066 NA coding upstream 105658 17362899 ~ 17365492 (-)
LOC110531963 LOC106573889 coding upstream 133655 17390896 ~ 17392469 (-)
LOC118942412 NA coding upstream 171036 17428277 ~ 17436513 (-)
G16158 NA non-coding downstream 818 17253790 ~ 17254418 (-)
G16150 NA non-coding downstream 16408 17238544 ~ 17238828 (-)
G16144 NA non-coding downstream 23558 17231380 ~ 17231678 (-)
G16100 LOC106573897 non-coding downstream 118879 17131420 ~ 17136357 (-)
G16004 NA non-coding downstream 246908 17005929 ~ 17008328 (-)
G16160 NA non-coding upstream 565 17257806 ~ 17258199 (-)
G16162 NA non-coding upstream 5137 17262378 ~ 17262650 (-)
G16183 NA non-coding upstream 43096 17300337 ~ 17300598 (-)
G16184 NA non-coding upstream 43487 17300728 ~ 17300937 (-)
G16185 NA non-coding upstream 43764 17301005 ~ 17301311 (-)
LOC110492105 homer3 other downstream 383308 16838135 ~ 16871992 (-)
G15470 NA other downstream 723760 16531047 ~ 16531476 (-)
LOC110531395 LOC106613616 other downstream 1038940 16181514 ~ 16295527 (-)
LOC110488740 cdc14a other downstream 1914355 15325555 ~ 15394233 (-)
LOC110497564 LOC106573866 other upstream 832639 18089520 ~ 18098678 (-)
LOC110497762 LOC106573859 other upstream 1132882 18390123 ~ 18450517 (-)
mydgf LOC106573827 other upstream 1619636 18876547 ~ 18888907 (-)
LOC110502937 ccl25 other upstream 2373252 19630376 ~ 19633058 (-)
G20266 NA other upstream 3541879 20799120 ~ 20800008 (-)

Expression


Co-expression Network