G15928


Basic Information

Item Value
gene id G15928
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 17314566 ~ 17314970 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU18676
aaaatacattttcacattTATATATTGGTGACAGAGTAATGGTAGACAAAAGTCCCCTGAGAACTGGAATTATTGTGGAGCGAATGTAAGACAGGAAAATCCTGTCATTGCTGGTGGTGATCAATATGTCAGCCGCCATTTTGCTGAGTGAAATCTCACTGGGtacgtctgaaatggcaccctattccctatatagtctttagtcaaaagtaCAACACTGTACTGTTCATCTGGGAGACGTGTTCCGGAATGTTGGGGTTGTAGATGCATTGTCTTCTCAGTCTTCATTTGGGCAGATGTGCGTGCCCTGTTAGAACTGCAGCTGGACCTGTTGGGCTTGGTATGTATCGAAGTCCCCAGGGATTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU18676 True 369 lncRNA 0.46 2 17314566 17314970

Neighbor

gene id symbol gene type direction distance location
LOC110494078 LOC106573895 coding upstream 640 17273600 ~ 17313926 (+)
klhl26 LOC106573902 coding upstream 42516 17263953 ~ 17272050 (+)
LOC110493709 LOC106573901 coding upstream 58306 17244353 ~ 17256260 (+)
LOC110493316 LOC106573897 coding upstream 178201 16982509 ~ 17136370 (+)
LOC110493012 NA coding upstream 333739 16976867 ~ 16980827 (+)
smim7 LOC106573893 coding downstream 29412 17344382 ~ 17347870 (+)
LOC110494277 LOC106573893 coding downstream 33478 17348448 ~ 17356979 (+)
slc35e1 LOC106573890 coding downstream 52079 17367049 ~ 17384408 (+)
LOC110494533 LOC106573888 coding downstream 105426 17420396 ~ 17436449 (+)
pex11g pex11g coding downstream 121819 17436789 ~ 17439767 (+)
G15865 NA non-coding upstream 56739 17257428 ~ 17257827 (+)
G15891 NA non-coding upstream 73949 17240391 ~ 17240617 (+)
G15743 NA non-coding upstream 341198 16973141 ~ 16973368 (+)
G15909 NA non-coding downstream 42731 17357701 ~ 17358053 (+)
G15942 NA non-coding downstream 44199 17359169 ~ 17360106 (+)
G15943 LOC106581475 non-coding downstream 46112 17361082 ~ 17361410 (+)
LOC110492876 LOC106613263 other upstream 346776 16962997 ~ 16967790 (+)
LOC110492606 LOC106573909 other upstream 394157 16916482 ~ 16920945 (+)
LOC118941201 NA other upstream 733684 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 1598884 15694810 ~ 15716774 (+)
sass6 sass6 other upstream 1846578 15447458 ~ 15468011 (+)
LOC110495874 LOC106573877 other downstream 339237 17654164 ~ 17673094 (+)
ccdc124 cc124 other downstream 660994 17975918 ~ 17991176 (+)
G17420 NA other downstream 1567753 18882723 ~ 18956208 (+)
G18481 NA other downstream 2249879 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 2253815 19568684 ~ 19575028 (+)

Expression


Co-expression Network