Gene
RNA
| Item | Value |
|---|---|
| gene id | G16275 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 17452473 ~ 17452740 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| amyloid beta A4 precursor protein-binding family A member 1-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU19094 | True | 268 | lncRNA | 0.42 | 1 | 17452473 | 17452740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942412 | NA | coding | downstream | 15960 | 17428277 ~ 17436513 (-) |
| LOC110531963 | LOC106573889 | coding | downstream | 60004 | 17390896 ~ 17392469 (-) |
| LOC118942066 | NA | coding | downstream | 86981 | 17362899 ~ 17365492 (-) |
| LOC110494221 | LOC100194656 | coding | downstream | 108923 | 17329927 ~ 17343550 (-) |
| comp | LOC106573894 | coding | downstream | 125714 | 17314484 ~ 17326759 (-) |
| LOC110495007 | NA | coding | upstream | 63927 | 17516667 ~ 17518593 (-) |
| LOC110531970 | LOC106573879 | coding | upstream | 148972 | 17601712 ~ 17619924 (-) |
| LOC110495805 | LOC106573878 | coding | upstream | 184669 | 17637409 ~ 17644659 (-) |
| jak3 | jak3 | coding | upstream | 419856 | 17872596 ~ 17911527 (-) |
| LOC110497425 | LOC106573868 | coding | upstream | 557764 | 18008683 ~ 18058602 (-) |
| G16274 | NA | non-coding | downstream | 249 | 17451748 ~ 17452224 (-) |
| G16272 | NA | non-coding | downstream | 3212 | 17449043 ~ 17449261 (-) |
| G16271 | NA | non-coding | downstream | 4110 | 17447910 ~ 17448363 (-) |
| G16228 | NA | non-coding | downstream | 74112 | 17377755 ~ 17378361 (-) |
| G16220 | NA | non-coding | downstream | 89924 | 17362332 ~ 17362549 (-) |
| G16277 | NA | non-coding | upstream | 403 | 17453143 ~ 17453557 (-) |
| G16556 | NA | non-coding | upstream | 72938 | 17525678 ~ 17526086 (-) |
| G16592 | LOC106573880 | non-coding | upstream | 109623 | 17562363 ~ 17563093 (-) |
| G16631 | NA | non-coding | upstream | 158946 | 17611686 ~ 17612072 (-) |
| G16673 | NA | non-coding | upstream | 255407 | 17708147 ~ 17739446 (-) |
| G16161 | LOC106573901 | other | downstream | 195232 | 17255236 ~ 17257241 (-) |
| G16100 | LOC106573897 | other | downstream | 316116 | 17131420 ~ 17136357 (-) |
| LOC110492105 | homer3 | other | downstream | 580545 | 16838135 ~ 16871992 (-) |
| G15470 | NA | other | downstream | 920997 | 16531047 ~ 16531476 (-) |
| LOC110531395 | LOC106613616 | other | downstream | 1236177 | 16181514 ~ 16295527 (-) |
| LOC110497564 | LOC106573866 | other | upstream | 637140 | 18089520 ~ 18098678 (-) |
| LOC110497762 | LOC106573859 | other | upstream | 937383 | 18390123 ~ 18450517 (-) |
| mydgf | LOC106573827 | other | upstream | 1424137 | 18876547 ~ 18888907 (-) |
| LOC110502937 | ccl25 | other | upstream | 2177753 | 19630376 ~ 19633058 (-) |
| G20266 | NA | other | upstream | 3346380 | 20799120 ~ 20800008 (-) |
