G16435


Basic Information

Item Value
gene id G16435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 17807662 ~ 17807882 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU19310
atggaaacccatttcatgaagctcccgacgaacagttcttgtgctgacattgcatccagaggcagttttgaactcggtagtgagtgttgcaaccgaggacagacgatttttacacgcttcattgaataacagcacttacagctgacaggggcagctctatcaggacagaaatttgatgaactcgcttgttggaaaggtggcatcatatgacagtgccacgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19310 True 221 lncRNA 0.43 1 17807662 17807882

Neighbor

gene id symbol gene type direction distance location
LOC110496410 LOC106573873 coding upstream 6947 17796045 ~ 17800715 (+)
LOC110496290 LOC106573874 coding upstream 26587 17744192 ~ 17781075 (+)
LOC110496031 LOC106573875 coding upstream 88749 17687590 ~ 17718913 (+)
LOC110495874 LOC106573877 coding upstream 134568 17654164 ~ 17673094 (+)
ndufs7 ndufs7 coding upstream 169998 17628667 ~ 17637664 (+)
LOC118942967 LOC106573872 coding downstream 27092 17834974 ~ 17836939 (+)
LOC118966550 NA coding downstream 34654 17842536 ~ 17856018 (+)
LOC110496754 b3gnt3 coding downstream 48983 17856865 ~ 17860158 (+)
slc5a5 slc5a5 coding downstream 106627 17914509 ~ 17943499 (+)
ccdc124 cc124 coding downstream 168036 17975918 ~ 17991176 (+)
G16429 NA non-coding upstream 18371 17789086 ~ 17789291 (+)
G16401 NA non-coding upstream 58231 17749140 ~ 17749431 (+)
G16317 NA non-coding upstream 64071 17740710 ~ 17743591 (+)
G16315 NA non-coding upstream 67045 17739775 ~ 17740617 (+)
G16436 NA non-coding downstream 395 17808277 ~ 17808547 (+)
G16437 NA non-coding downstream 704 17808586 ~ 17808820 (+)
G16440 NA non-coding downstream 7295 17815177 ~ 17815450 (+)
G16417 NA non-coding downstream 63168 17871050 ~ 17873125 (+)
G16499 NA non-coding downstream 110694 17918576 ~ 17918787 (+)
LOC110492876 LOC106613263 other upstream 839872 16962997 ~ 16967790 (+)
LOC110492606 LOC106573909 other upstream 887253 16916482 ~ 16920945 (+)
LOC118941201 NA other upstream 1226780 16578956 ~ 16592967 (+)
LOC110490510 LOC106573976 other upstream 2091980 15694810 ~ 15716774 (+)
G17420 NA other downstream 1074841 18882723 ~ 18956208 (+)
G18481 NA other downstream 1756967 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 1760903 19568684 ~ 19575028 (+)
LOC110503939 LOC106573564 other downstream 2055909 19863734 ~ 19865619 (+)

Expression


Co-expression Network