Gene
RNA
| Item | Value |
|---|---|
| gene id | G17567 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 18999100 ~ 18999303 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20569 | True | 204 | lncRNA | 0.47 | 1 | 18999100 | 18999303 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110500236 | LOC106573821 | coding | upstream | 26914 | 18957927 ~ 18972186 (+) |
| LOC110500115 | LOC106573822 | coding | upstream | 45055 | 18922258 ~ 18954045 (+) |
| LOC110499562 | LOC106573826 | coding | upstream | 120183 | 18859952 ~ 18878917 (+) |
| tnfaip8l1 | LOC106573828 | coding | upstream | 146146 | 18841198 ~ 18852954 (+) |
| LOC110499138 | LOC106573831 | coding | upstream | 233143 | 18737655 ~ 18765957 (+) |
| LOC110500307 | LOC106573820 | coding | downstream | 24913 | 19024216 ~ 19041967 (+) |
| LOC110500387 | cherp | coding | downstream | 53272 | 19052575 ~ 19064650 (+) |
| calr3a | crt | coding | downstream | 69689 | 19068992 ~ 19076771 (+) |
| rad23ab | LOC106573817 | coding | downstream | 77521 | 19076824 ~ 19084655 (+) |
| eps15l1a | eps15l1 | coding | downstream | 91922 | 19091225 ~ 19121925 (+) |
| G17566 | NA | non-coding | upstream | 4494 | 18994217 ~ 18994606 (+) |
| G17561 | NA | non-coding | upstream | 8028 | 18990811 ~ 18991072 (+) |
| G17555 | NA | non-coding | upstream | 15371 | 18983459 ~ 18983729 (+) |
| G17546 | NA | non-coding | upstream | 48846 | 18949502 ~ 18950254 (+) |
| G17453 | NA | non-coding | upstream | 198181 | 18761536 ~ 18800919 (+) |
| G17576 | NA | non-coding | downstream | 9588 | 19008891 ~ 19009130 (+) |
| G17564 | NA | non-coding | downstream | 44116 | 19043419 ~ 19045873 (+) |
| G17601 | NA | non-coding | downstream | 48719 | 19048022 ~ 19048280 (+) |
| G17605 | NA | non-coding | downstream | 80976 | 19080279 ~ 19080491 (+) |
| G17606 | NA | non-coding | downstream | 81582 | 19080885 ~ 19081096 (+) |
| G17420 | NA | other | upstream | 42892 | 18882723 ~ 18956208 (+) |
| ccdc124 | cc124 | other | upstream | 1007924 | 17975918 ~ 17991176 (+) |
| LOC110495874 | LOC106573877 | other | upstream | 1334092 | 17654164 ~ 17673094 (+) |
| LOC110492876 | LOC106613263 | other | upstream | 2031310 | 16962997 ~ 16967790 (+) |
| LOC110492606 | LOC106573909 | other | upstream | 2078691 | 16916482 ~ 16920945 (+) |
| G18481 | NA | other | downstream | 565546 | 19564849 ~ 19565221 (+) |
| LOC110502506 | LOC106573550 | other | downstream | 569482 | 19568684 ~ 19575028 (+) |
| LOC110503939 | LOC106573564 | other | downstream | 864488 | 19863734 ~ 19865619 (+) |
| G19083 | NA | other | downstream | 916283 | 19915586 ~ 19915832 (+) |
| G19359 | NA | other | downstream | 1243342 | 20242645 ~ 20242875 (+) |
