Gene
RNA
| Item | Value |
|---|---|
| gene id | G18189 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 19079594 ~ 19079817 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU21242 | True | 224 | lncRNA | 0.43 | 1 | 19079594 | 19079817 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c1h19orf44 | crt | coding | downstream | 9101 | 19064745 ~ 19071856 (-) |
| LOC110499955 | LOC106573823 | coding | downstream | 158448 | 18905215 ~ 18921146 (-) |
| LOC110499862 | LOC106573825 | coding | downstream | 183824 | 18890820 ~ 18895770 (-) |
| mydgf | LOC106573827 | coding | downstream | 190687 | 18876547 ~ 18888907 (-) |
| LOC110531991 | LOC106573830 | coding | downstream | 238105 | 18834162 ~ 18841489 (-) |
| LOC110501271 | klf2 | coding | upstream | 48766 | 19128583 ~ 19131233 (-) |
| LOC110501398 | ap1m1 | coding | upstream | 229888 | 19309705 ~ 19334685 (-) |
| fam32a | fa32a | coding | upstream | 260591 | 19340408 ~ 19342021 (-) |
| LOC110501773 | LOC106573544 | coding | upstream | 373100 | 19452917 ~ 19464238 (-) |
| LOC110501969 | LOC106573546 | coding | upstream | 394771 | 19474588 ~ 19483323 (-) |
| G18178 | NA | non-coding | downstream | 3972 | 19075170 ~ 19075622 (-) |
| G18141 | NA | non-coding | downstream | 34599 | 19044706 ~ 19044995 (-) |
| G18169 | NA | non-coding | downstream | 36632 | 19042069 ~ 19042962 (-) |
| G18145 | NA | non-coding | downstream | 72025 | 19007342 ~ 19007569 (-) |
| G18190 | NA | non-coding | upstream | 117 | 19079934 ~ 19080190 (-) |
| G18192 | LOC106573817 | non-coding | upstream | 1952 | 19081769 ~ 19082501 (-) |
| G18193 | LOC106573817 | non-coding | upstream | 3687 | 19083504 ~ 19083744 (-) |
| G18191 | NA | non-coding | upstream | 4394 | 19084211 ~ 19087816 (-) |
| G18199 | NA | non-coding | upstream | 15215 | 19095032 ~ 19096204 (-) |
| LOC110497762 | LOC106573859 | other | downstream | 684734 | 18390123 ~ 18450517 (-) |
| LOC110497564 | LOC106573866 | other | downstream | 984656 | 18089520 ~ 18098678 (-) |
| G16161 | LOC106573901 | other | downstream | 1822353 | 17255236 ~ 17257241 (-) |
| G16100 | LOC106573897 | other | downstream | 1943237 | 17131420 ~ 17136357 (-) |
| LOC110502937 | ccl25 | other | upstream | 550676 | 19630376 ~ 19633058 (-) |
| G20266 | NA | other | upstream | 1719303 | 20799120 ~ 20800008 (-) |
| LOC118945319 | NA | other | upstream | 2005481 | 21085298 ~ 21089250 (-) |
| LOC110507736 | LOC106573601 | other | upstream | 2456116 | 21535882 ~ 21565723 (-) |
| G21993 | NA | other | upstream | 3302053 | 22381870 ~ 22382208 (-) |
