Gene
RNA
| Item | Value |
|---|---|
| gene id | G18281 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 19222749 ~ 19222978 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: lys-63-specific deubiquitinase BRCC36-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU21343 | True | 230 | lncRNA | 0.37 | 1 | 19222749 | 19222978 |
19,221,600
19,222,000
19,222,400
19,222,800
19,223,200
19,223,600
19,224,000
19,224,400
19,224,800
19,225,200
19,225,600
19,226,000
NC_048565.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| eps15l1a | eps15l1 | coding | upstream | 100824 | 19091225 ~ 19121925 (+) |
| rad23ab | LOC106573817 | coding | upstream | 138094 | 19076824 ~ 19084655 (+) |
| calr3a | crt | coding | upstream | 145978 | 19068992 ~ 19076771 (+) |
| LOC110500387 | cherp | coding | upstream | 158099 | 19052575 ~ 19064650 (+) |
| LOC110500307 | LOC106573820 | coding | upstream | 180782 | 19024216 ~ 19041967 (+) |
| mrpl54 | LOC106573541 | coding | downstream | 126194 | 19349172 ~ 19351119 (+) |
| LOC110532010 | LOC106613687 | coding | downstream | 129112 | 19352090 ~ 19357017 (+) |
| LOC110501592 | LOC106573542 | coding | downstream | 136433 | 19359411 ~ 19368957 (+) |
| si:ch1073-396h14.1 | LOC106573543 | coding | downstream | 162006 | 19384984 ~ 19442316 (+) |
| tpm4a | LOC106573547 | coding | downstream | 287979 | 19510957 ~ 19536556 (+) |
| G17642 | NA | non-coding | upstream | 64583 | 19157912 ~ 19158166 (+) |
| G17640 | NA | non-coding | upstream | 66571 | 19155664 ~ 19156178 (+) |
| G17616 | NA | non-coding | upstream | 100164 | 19122252 ~ 19122585 (+) |
| G17615 | NA | non-coding | upstream | 109802 | 19112467 ~ 19112947 (+) |
| G18288 | NA | non-coding | downstream | 6823 | 19229801 ~ 19230019 (+) |
| G18341 | NA | non-coding | downstream | 85799 | 19308777 ~ 19308984 (+) |
| G18361 | NA | non-coding | downstream | 112532 | 19335510 ~ 19335916 (+) |
| G18364 | NA | non-coding | downstream | 114041 | 19337019 ~ 19339253 (+) |
| G18454 | NA | non-coding | downstream | 282545 | 19505523 ~ 19505847 (+) |
| G17420 | NA | other | upstream | 266541 | 18882723 ~ 18956208 (+) |
| ccdc124 | cc124 | other | upstream | 1231573 | 17975918 ~ 17991176 (+) |
| LOC110495874 | LOC106573877 | other | upstream | 1557741 | 17654164 ~ 17673094 (+) |
| LOC110492876 | LOC106613263 | other | upstream | 2254959 | 16962997 ~ 16967790 (+) |
| LOC110492606 | LOC106573909 | other | upstream | 2302340 | 16916482 ~ 16920945 (+) |
| G18481 | NA | other | downstream | 341871 | 19564849 ~ 19565221 (+) |
| LOC110502506 | LOC106573550 | other | downstream | 345807 | 19568684 ~ 19575028 (+) |
| LOC110503939 | LOC106573564 | other | downstream | 640813 | 19863734 ~ 19865619 (+) |
| G19083 | NA | other | downstream | 692608 | 19915586 ~ 19915832 (+) |
| G19359 | NA | other | downstream | 1019667 | 20242645 ~ 20242875 (+) |
