G18704



Basic Information


Item Value
gene id G18704
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19343449 ~ 19343769 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU21800
ctcaggagaccatccgccacctcaccaggagcatgcccaggcattgtagggaggtcatacaggcacgtggaggctacacacactactgagcctcattttgacttgttttaaggacattacatcaaagttggatcagcctgtagtgtggtttttcactttaattttgagtgtcacaacaaatccagacctccatgggttgataaatttgatttccattgatcatttttgtgtgattttgttgtcagcacattcaactatgtaaagaaaagagtatttaataagaatatttcattcattcagatctaggatgtgttattttag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU21800 True 321 lncRNA 0.46 1 19343449 19343769

Neighbor


gene id symbol gene type direction distance location
fam32a fa32a coding downstream 1428 19340408 ~ 19342021 (-)
LOC110501398 ap1m1 coding downstream 8764 19309705 ~ 19334685 (-)
LOC110501271 klf2 coding downstream 212216 19128583 ~ 19131233 (-)
c1h19orf44 crt coding downstream 272956 19064745 ~ 19071856 (-)
LOC110499955 LOC106573823 coding downstream 422303 18905215 ~ 18921146 (-)
LOC110501773 LOC106573544 coding upstream 109148 19452917 ~ 19464238 (-)
LOC110501969 LOC106573546 coding upstream 130819 19474588 ~ 19483323 (-)
LOC110502382 LOC106573549 coding upstream 192658 19536427 ~ 19538782 (-)
LOC110502819 dpoe4 coding upstream 261395 19605164 ~ 19620194 (-)
LOC110502937 ccl25 coding upstream 286607 19630376 ~ 19633058 (-)
G18700 NA non-coding downstream 4523 19337045 ~ 19338926 (-)
G18646 NA non-coding downstream 84589 19258582 ~ 19258860 (-)
G18236 NA non-coding downstream 184901 19158285 ~ 19158548 (-)
G18234 NA non-coding downstream 186030 19157208 ~ 19157419 (-)
G18199 NA non-coding downstream 247245 19095032 ~ 19096204 (-)
G18714 NA non-coding upstream 10885 19354654 ~ 19354999 (-)
G18686 NA non-coding upstream 24221 19367990 ~ 19368944 (-)
G18720 NA non-coding upstream 26687 19370456 ~ 19371565 (-)
G18825 NA non-coding upstream 158465 19502234 ~ 19502547 (-)
mydgf LOC106573827 other downstream 457797 18876547 ~ 18888907 (-)
LOC110497762 LOC106573859 other downstream 948589 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 1248511 18089520 ~ 18098678 (-)
G16161 LOC106573901 other downstream 2086208 17255236 ~ 17257241 (-)
G16100 LOC106573897 other downstream 2207092 17131420 ~ 17136357 (-)
G20266 NA other upstream 1455351 20799120 ~ 20800008 (-)
LOC118945319 NA other upstream 1741529 21085298 ~ 21089250 (-)
LOC110507736 LOC106573601 other upstream 2192164 21535882 ~ 21565723 (-)
G21993 NA other upstream 3038101 22381870 ~ 22382208 (-)

Expression



Co-expression Network