G18686


Basic Information

Item Value
gene id G18686
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19367990 ~ 19368944 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU21778
TTGCACTGCAAAAAGAATTTTATTAGGCAGCATTTTCATTTCACAGAAAAATAGCCATCAGGTGCCATCCAGTGGTATAGTACAACTGCAGTTGAATCTGACACGGTTGTGGGTCCTATTGTGAACATGTACTTCTGTTCTGTGAAGAAGTTACAGTGTCAATACAAAGTCTGAAAAAGAGTTGTTTAAGTACAAAAACTAAAGACAATGACAGTTACTGAAATTAAGTCTGAAACAATCATGATCATTAATGGGTTCGTACTTCTCCGCAGTTCGTAAGTTCCCCACAGGTTTTAGCAAACGGTTTAAGCAGACGCATTCCTGAGCATTTCTACCAAAATTCAAACCCATACAAATCACTTAAAATACAccaaaaatagaaaataaaaaaaatccaatcAATTTGAAAACAAAAAGGACACTCCGAATGAAAAACCAATGGATGATCTGATCAGAGACATTTAAAACTCAGATGTTCAGTTCAATCGTGTCTTAGTTTGAGGAAAGAAAGTCAAAGGGACTATAAAAGCAACATCTGAATTCACGAAGCTTCCGTGAGCAATATACAAGCTGCAGACGGTTTCACTTGCATACACTTAAACGTGTGACTGGGAACAAGGGTGTTCAGACCTCAGTAGCGGCGACCGAATGCCCcgccaccctgcatcccactgcctTGCATCATCTGGTTCTGACGATTCAGAGCTCCAGAGAGGGACTGGGAGGTCCCCGTTGGCATGTAGCCTCCACCACGACCTGCCATTCCTCCCCGTGCCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21778 True 779 lncRNA 0.39 2 19367990 19368944

Neighbor

gene id symbol gene type direction distance location
fam32a fa32a coding downstream 25969 19340408 ~ 19342021 (-)
LOC110501398 ap1m1 coding downstream 33305 19309705 ~ 19334685 (-)
LOC110501271 klf2 coding downstream 236757 19128583 ~ 19131233 (-)
c1h19orf44 crt coding downstream 297497 19064745 ~ 19071856 (-)
LOC110499955 LOC106573823 coding downstream 446844 18905215 ~ 18921146 (-)
LOC110501773 LOC106573544 coding upstream 83973 19452917 ~ 19464238 (-)
LOC110501969 LOC106573546 coding upstream 105644 19474588 ~ 19483323 (-)
LOC110502382 LOC106573549 coding upstream 167483 19536427 ~ 19538782 (-)
LOC110502819 dpoe4 coding upstream 236220 19605164 ~ 19620194 (-)
LOC110502937 ccl25 coding upstream 261432 19630376 ~ 19633058 (-)
G18714 NA non-coding downstream 12991 19354654 ~ 19354999 (-)
G18704 NA non-coding downstream 24221 19343449 ~ 19343769 (-)
G18700 NA non-coding downstream 29064 19337045 ~ 19338926 (-)
G18646 NA non-coding downstream 109130 19258582 ~ 19258860 (-)
G18236 NA non-coding downstream 209442 19158285 ~ 19158548 (-)
G18720 NA non-coding upstream 1512 19370456 ~ 19371565 (-)
G18825 NA non-coding upstream 133290 19502234 ~ 19502547 (-)
G18852 NA non-coding upstream 192582 19561526 ~ 19561735 (-)
G18853 NA non-coding upstream 194438 19563382 ~ 19564405 (-)
mydgf LOC106573827 other downstream 482338 18876547 ~ 18888907 (-)
LOC110497762 LOC106573859 other downstream 973130 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 1273052 18089520 ~ 18098678 (-)
G16161 LOC106573901 other downstream 2110749 17255236 ~ 17257241 (-)
G16100 LOC106573897 other downstream 2231633 17131420 ~ 17136357 (-)
G20266 NA other upstream 1430176 20799120 ~ 20800008 (-)
LOC118945319 NA other upstream 1716354 21085298 ~ 21089250 (-)
LOC110507736 LOC106573601 other upstream 2166989 21535882 ~ 21565723 (-)
G21993 NA other upstream 3012926 22381870 ~ 22382208 (-)

Expression

G18686 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 12.
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G18686 Expression in each Bioproject

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G18686 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network