G18918


Basic Information

Item Value
gene id G18918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19685524 ~ 19686405 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU22036
cttctaccccaatccataagacagataaatagttagtgaaatagttaaccaatagctacccgggaaaatctgcattgaccctttttgcacaaactattttgactcatcactgtcatgactgtccacgagaatccaaataggtcagatcaggttTACAAAGAATAACTTCAGGTCCCCCTCTCCAACATTCACCAAAGGCATGTTCTTTGTTTCAACAAACTTTTCCCGCTGAAACTCTAACACGTTCAAATGTGAATACTGGAACAATGTTTCTAACATAGCACGTGGGGTATGGTTCGAGGCAATCTATGGAACACTAATgtcattttgtttgttattttgtgattgttatggtgagtgaatgaggacccaaaagcgaactaacttaaacagagcttctttaataaccaaacataggtaggctcagatagaccggcagattccgacaggacaggacaaggttacagcaaacatgacgatagtctggctcaggcatgaaacacaacaaacaagaatccgacaaggacaggaacagaaacagagagagatatagggacctaatcagagggaaaaagggaacaggtgggaaacggggtgaatgggtagtcagaggagacaaggaacagctgggggaaagcgggggagaaaaggtaacctaacaacgaccagcagagggagacagggtgaagggaaaggacagagacaagacacaacatgacagtacatgacagtacccccccactcaccgagcgcctcctggcgcactcgaggaggaaacctggcggcaacggaggaaatcctcgatcagcgcacggtccagcacgtcccgagagggaacccaactcctctcctcaggaccgtacccctcccaatccacgaggt

Function

NR:

description
PREDICTED: thrombospondin-3b-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22036 True 882 lncRNA 0.38 1 19685524 19686405

Neighbor

gene id symbol gene type direction distance location
LOC110502937 ccl25 coding downstream 52466 19630376 ~ 19633058 (-)
LOC110502819 dpoe4 coding downstream 65330 19605164 ~ 19620194 (-)
LOC110502382 LOC106573549 coding downstream 146742 19536427 ~ 19538782 (-)
LOC110501969 LOC106573546 coding downstream 202201 19474588 ~ 19483323 (-)
LOC110501773 LOC106573544 coding downstream 221286 19452917 ~ 19464238 (-)
LOC110503352 LOC106573557 coding upstream 46464 19732869 ~ 19743641 (-)
LOC110503449 LOC106611608 coding upstream 142920 19829325 ~ 19832397 (-)
LOC110503510 nduab coding upstream 149868 19836273 ~ 19838863 (-)
larp6b LOC106573560 coding upstream 155116 19841521 ~ 19844225 (-)
tmprss9 tmprss9 coding upstream 179477 19865882 ~ 19890280 (-)
G18917 NA non-coding downstream 371 19684895 ~ 19685153 (-)
G18906 NA non-coding downstream 16002 19669298 ~ 19669522 (-)
G18905 NA non-coding downstream 18080 19667245 ~ 19667444 (-)
G18903 NA non-coding downstream 19859 19664312 ~ 19665665 (-)
G18904 NA non-coding downstream 21618 19661353 ~ 19663906 (-)
G18921 NA non-coding upstream 2949 19689354 ~ 19689576 (-)
G18922 NA non-coding upstream 3524 19689929 ~ 19690193 (-)
G18960 NA non-coding upstream 56447 19742852 ~ 19743141 (-)
G18966 NA non-coding upstream 65052 19751457 ~ 19751810 (-)
G18981 NA non-coding upstream 90592 19776997 ~ 19809300 (-)
mydgf LOC106573827 other downstream 799872 18876547 ~ 18888907 (-)
LOC110497762 LOC106573859 other downstream 1290664 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 1590586 18089520 ~ 18098678 (-)
G16161 LOC106573901 other downstream 2428283 17255236 ~ 17257241 (-)
G20266 NA other upstream 1112715 20799120 ~ 20800008 (-)
LOC118945319 NA other upstream 1398893 21085298 ~ 21089250 (-)
LOC110507736 LOC106573601 other upstream 1849528 21535882 ~ 21565723 (-)
G21993 NA other upstream 2695465 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 3153440 22839845 ~ 22843305 (-)

Expression


Co-expression Network