Gene
RNA
| Item | Value |
|---|---|
| gene id | G18921 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 19689354 ~ 19689576 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: NACHT, LRR and PYD domains-containing protein 12-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU22039 | True | 223 | lncRNA | 0.49 | 1 | 19689354 | 19689576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502937 | ccl25 | coding | downstream | 56296 | 19630376 ~ 19633058 (-) |
| LOC110502819 | dpoe4 | coding | downstream | 69160 | 19605164 ~ 19620194 (-) |
| LOC110502382 | LOC106573549 | coding | downstream | 150572 | 19536427 ~ 19538782 (-) |
| LOC110501969 | LOC106573546 | coding | downstream | 206031 | 19474588 ~ 19483323 (-) |
| LOC110501773 | LOC106573544 | coding | downstream | 225116 | 19452917 ~ 19464238 (-) |
| LOC110503352 | LOC106573557 | coding | upstream | 43293 | 19732869 ~ 19743641 (-) |
| LOC110503449 | LOC106611608 | coding | upstream | 139749 | 19829325 ~ 19832397 (-) |
| LOC110503510 | nduab | coding | upstream | 146697 | 19836273 ~ 19838863 (-) |
| larp6b | LOC106573560 | coding | upstream | 151945 | 19841521 ~ 19844225 (-) |
| tmprss9 | tmprss9 | coding | upstream | 176306 | 19865882 ~ 19890280 (-) |
| G18918 | NA | non-coding | downstream | 2949 | 19685524 ~ 19686405 (-) |
| G18917 | NA | non-coding | downstream | 4201 | 19684895 ~ 19685153 (-) |
| G18906 | NA | non-coding | downstream | 19832 | 19669298 ~ 19669522 (-) |
| G18905 | NA | non-coding | downstream | 21910 | 19667245 ~ 19667444 (-) |
| G18903 | NA | non-coding | downstream | 23689 | 19664312 ~ 19665665 (-) |
| G18922 | NA | non-coding | upstream | 353 | 19689929 ~ 19690193 (-) |
| G18960 | NA | non-coding | upstream | 53276 | 19742852 ~ 19743141 (-) |
| G18966 | NA | non-coding | upstream | 61881 | 19751457 ~ 19751810 (-) |
| G18981 | NA | non-coding | upstream | 87421 | 19776997 ~ 19809300 (-) |
| G19004 | NA | non-coding | upstream | 122396 | 19811972 ~ 19812249 (-) |
| mydgf | LOC106573827 | other | downstream | 803702 | 18876547 ~ 18888907 (-) |
| LOC110497762 | LOC106573859 | other | downstream | 1294494 | 18390123 ~ 18450517 (-) |
| LOC110497564 | LOC106573866 | other | downstream | 1594416 | 18089520 ~ 18098678 (-) |
| G16161 | LOC106573901 | other | downstream | 2432113 | 17255236 ~ 17257241 (-) |
| G20266 | NA | other | upstream | 1109544 | 20799120 ~ 20800008 (-) |
| LOC118945319 | NA | other | upstream | 1395722 | 21085298 ~ 21089250 (-) |
| LOC110507736 | LOC106573601 | other | upstream | 1846357 | 21535882 ~ 21565723 (-) |
| G21993 | NA | other | upstream | 2692294 | 22381870 ~ 22382208 (-) |
| G22350 | LOC106573623 | other | upstream | 3150269 | 22839845 ~ 22843305 (-) |
