G18922



Basic Information


Item Value
gene id G18922
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19689929 ~ 19690193 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU22040
tttcccttcaccctgtctccctctgctggtcgttgttaggttacctttccaccccctctttcccccagctgtgccttgtctcctcctaaccacctcgtcaccccttttcccacctgttccctttttccctctgattagtcccctatatctctctctgtttttgttcctgtccttgtcggattattgtttgttgtgtttcatgcctgaaccagactgtcgtcatgtttgctgtaaccttgtcttgtcctgtcggaatctgccggtc

Function


GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU22040 True 265 lncRNA 0.38 1 19689929 19690193

Neighbor


gene id symbol gene type direction distance location
LOC110502937 ccl25 coding downstream 56871 19630376 ~ 19633058 (-)
LOC110502819 dpoe4 coding downstream 69735 19605164 ~ 19620194 (-)
LOC110502382 LOC106573549 coding downstream 151147 19536427 ~ 19538782 (-)
LOC110501969 LOC106573546 coding downstream 206606 19474588 ~ 19483323 (-)
LOC110501773 LOC106573544 coding downstream 225691 19452917 ~ 19464238 (-)
LOC110503352 LOC106573557 coding upstream 42676 19732869 ~ 19743641 (-)
LOC110503449 LOC106611608 coding upstream 139132 19829325 ~ 19832397 (-)
LOC110503510 nduab coding upstream 146080 19836273 ~ 19838863 (-)
larp6b LOC106573560 coding upstream 151328 19841521 ~ 19844225 (-)
tmprss9 tmprss9 coding upstream 175689 19865882 ~ 19890280 (-)
G18921 NA non-coding downstream 353 19689354 ~ 19689576 (-)
G18918 NA non-coding downstream 3524 19685524 ~ 19686405 (-)
G18917 NA non-coding downstream 4776 19684895 ~ 19685153 (-)
G18906 NA non-coding downstream 20407 19669298 ~ 19669522 (-)
G18905 NA non-coding downstream 22485 19667245 ~ 19667444 (-)
G18960 NA non-coding upstream 52659 19742852 ~ 19743141 (-)
G18966 NA non-coding upstream 61264 19751457 ~ 19751810 (-)
G18981 NA non-coding upstream 86804 19776997 ~ 19809300 (-)
G19004 NA non-coding upstream 121779 19811972 ~ 19812249 (-)
G19006 NA non-coding upstream 124590 19814783 ~ 19815136 (-)
mydgf LOC106573827 other downstream 804277 18876547 ~ 18888907 (-)
LOC110497762 LOC106573859 other downstream 1295069 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 1594991 18089520 ~ 18098678 (-)
G16161 LOC106573901 other downstream 2432688 17255236 ~ 17257241 (-)
G20266 NA other upstream 1108927 20799120 ~ 20800008 (-)
LOC118945319 NA other upstream 1395105 21085298 ~ 21089250 (-)
LOC110507736 LOC106573601 other upstream 1845740 21535882 ~ 21565723 (-)
G21993 NA other upstream 2691677 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 3149652 22839845 ~ 22843305 (-)

Expression



Co-expression Network