Gene
RNA
| Item | Value |
|---|---|
| gene id | G19097 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 19869552 ~ 19869963 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU22228 | True | 412 | lncRNA | 0.38 | 1 | 19869552 | 19869963 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| larp6b | LOC106573560 | coding | downstream | 25327 | 19841521 ~ 19844225 (-) |
| LOC110503510 | nduab | coding | downstream | 30689 | 19836273 ~ 19838863 (-) |
| LOC110503449 | LOC106611608 | coding | downstream | 37155 | 19829325 ~ 19832397 (-) |
| LOC110503352 | LOC106573557 | coding | downstream | 125911 | 19732869 ~ 19743641 (-) |
| LOC110502937 | ccl25 | coding | downstream | 236494 | 19630376 ~ 19633058 (-) |
| LOC110504151 | NA | coding | upstream | 49602 | 19919565 ~ 19934801 (-) |
| LOC110504304 | LOC106573568 | coding | upstream | 226435 | 20096398 ~ 20117301 (-) |
| LOC110505227 | LOC106573572 | coding | upstream | 310153 | 20180116 ~ 20187417 (-) |
| LOC110505456 | LOC106573574 | coding | upstream | 335613 | 20205576 ~ 20211949 (-) |
| LOC110505628 | LOC106573575 | coding | upstream | 342957 | 20212920 ~ 20216964 (-) |
| tmprss9 | tmprss9 | non-coding | downstream | 166 | 19865882 ~ 19890280 (-) |
| G19089 | NA | non-coding | downstream | 3947 | 19864678 ~ 19865605 (-) |
| G19038 | NA | non-coding | downstream | 12311 | 19856969 ~ 19857241 (-) |
| G19034 | NA | non-coding | downstream | 15205 | 19854125 ~ 19854347 (-) |
| G19032 | NA | non-coding | downstream | 23600 | 19845632 ~ 19845952 (-) |
| G19100 | NA | non-coding | upstream | 3558 | 19873521 ~ 19873836 (-) |
| G19121 | NA | non-coding | upstream | 37481 | 19907444 ~ 19908250 (-) |
| G19128 | NA | non-coding | upstream | 45997 | 19915960 ~ 19916186 (-) |
| G19141 | NA | non-coding | upstream | 58413 | 19928376 ~ 19928661 (-) |
| mydgf | LOC106573827 | other | downstream | 983900 | 18876547 ~ 18888907 (-) |
| LOC110497762 | LOC106573859 | other | downstream | 1474692 | 18390123 ~ 18450517 (-) |
| LOC110497564 | LOC106573866 | other | downstream | 1774614 | 18089520 ~ 18098678 (-) |
| G16161 | LOC106573901 | other | downstream | 2612311 | 17255236 ~ 17257241 (-) |
| G20266 | NA | other | upstream | 929157 | 20799120 ~ 20800008 (-) |
| LOC118945319 | NA | other | upstream | 1215335 | 21085298 ~ 21089250 (-) |
| LOC110507736 | LOC106573601 | other | upstream | 1665970 | 21535882 ~ 21565723 (-) |
| G21993 | NA | other | upstream | 2511907 | 22381870 ~ 22382208 (-) |
| G22350 | LOC106573623 | other | upstream | 2969882 | 22839845 ~ 22843305 (-) |
