XLOC_019997 (znf1167)


Basic Information

Item Value
gene id XLOC_019997
gene name znf1167
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 1940595 ~ 1945452 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039857
ATTCAGCGTCGAGTCTTAAGAGCTGAGctctgccgccatcagtgaaagacaaagacagagtttattgaaggacagtgagaagatgagtgatccagaaccctgcagaattaaacaggaggagactgaagaactaatagATGTGATTGTtaaggaggagagtgaagaactgagtgaagatgaggagaaacatcatgtcaagaGGGAAGAAGAAACTCAATCAGAGGCTGAAGATAGTTTTTCAGTGGAAAGAACAGCTGTGAAACCTTTTACCTGCattgagtgtggaaagagttacaGCCGCAAATCCAGTCTCAAGATTCACAtaaggattcacactggagagagaccttaccagtgttcacactgcgacaagagattcagtagTTCAGAAAACCTGAATTCACATGAGAGAATACACTTaagagagaaaccttacaagtgttcacactgcgacagcAGATTCAATCGTTCAGAAAACCTGAAGACACACatgctgatccacactggagagaaaacacacggatgtgatcaatgcagcaaaacatttttgagggcTTCAGAGCTGAAGATCCATCTTAGAGCTCACGCAAACGAGAGGCCTCATATATGttctgagtgtgggaagagttttacacagaaatcacatttaaaagaccatcagaagatccacactggtgtgagagagtttgTCTG

Function

symbol description
znf1167 Predicted to enable metal ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-547 Predicted to enable metal ion binding activity.

Ensembl:

ensembl_id ENSDARG00000071725

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039857 True 693 mRNA 0.43 3 1940595 1945452

Neighbor

gene id symbol gene type direction distance location
XLOC_019996 znf1153 coding upstream 4751 1930589 ~ 1935844 (+)
XLOC_019995 znf1181 coding upstream 15249 1922293 ~ 1925346 (+)
XLOC_019994 znf1156 coding upstream 20996 1911269 ~ 1919599 (+)
XLOC_019993 si:dkey-15h8.10 coding upstream 31171 1904546 ~ 1909424 (+)
XLOC_019992 znf1158 coding upstream 38890 1899142 ~ 1901705 (+)
XLOC_019998 si:dkey-15h8.15 coding downstream 1224 1946676 ~ 1949027 (+)
XLOC_019999 zgc:174222 coding downstream 7644 1953096 ~ 1960772 (+)
XLOC_020000 NA coding downstream 61789 2007241 ~ 2290657 (+)
XLOC_020001 znf1174 coding downstream 86571 2032023 ~ 2034151 (+)
XLOC_020002 znf1144 coding downstream 165668 2111120 ~ 2118122 (+)
XLOC_019991 BX640576.1 non-coding upstream 59925 1878147 ~ 1880670 (+)
XLOC_019977 BX649416.3 non-coding upstream 208485 1725568 ~ 1732110 (+)
XLOC_019971 NA non-coding upstream 275124 1660187 ~ 1665471 (+)
XLOC_019970 BX649416.2 non-coding upstream 286657 1650128 ~ 1653938 (+)
XLOC_019963 AL954741.1 non-coding upstream 362849 1576863 ~ 1577746 (+)
XLOC_020006 BX640537.2 non-coding downstream 214587 2160039 ~ 2163446 (+)
XLOC_020007 BX640537.1 non-coding downstream 230405 2175857 ~ 2178463 (+)
XLOC_020013 NA non-coding downstream 291700 2237152 ~ 2239093 (+)
XLOC_020033 NA non-coding downstream 600634 2546086 ~ 2546878 (+)

Expression


Co-expression Network