XLOC_000020 (blzf1)


Basic Information

Item Value
gene id XLOC_000020
gene name blzf1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 494297 ~ 505620 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000041
CACAATGGTTCCACCTTCATCAGTTCCGTCACAAATCTTCAGCCGCTTCCGGTTTCGAGATGCCTGTGTGAACTCGACACTCCAAGAGGTGTCCAGCAGTGTTGTGTTCTGGAAGTGGAAAAGGAGTGTGCAGTAATGATGTCTGCTGAACTGATCATTAAAGATGTGTCAGTGGTGGCCGTGCGGGGCCCTGGCGATGGCATGGAGACAGATAAACCCCTGCCAGCCCCTGAGCAGCTGACGGAGGCCCCGCTCCAGAAGATCTGCTCTCCTAAACACAGCCCGAGAGTGGCCACCGGGTCTCCAGGAGTGCTGCACCTGGGCAAGGTGAGCCGGGACGCCTGTTTGGAGCTGGAGGCAGTGAGGATCGTGGTTCCCCGGGCTGCCATCATCCGCACCGGGCGCTCAGGGGCGCACACTGATGACAGGGGGTCTCCTCAACACGGGGACGAGCCTCCACCTGCTCCACCCTCACCTCCACCTCCAGCAGAGCCGCTGCAGGAGTACAAGAACAGCCTGGAGAAACTGCAGAGCTCAGAGAGACGCCTGCTGCAGGATAAAGAAGGCCTGTCCAACCAGCTGAGGGTCCAGACCGAGgtgAACCGTGAGCTGAAGAAGCTGCTGGTGGCGTCAGTCGGTGATGATCTGCAGTATCACTTTGAGCGCCTGGCGAGAGAAAAAAACCACCTGATCCTGGAGAACGAGACTCTGTGCCGAAACCTGTCGCACACGGCGGAGCAGCTGGAGCGCATGAGCATTCAGTGTGACGTCTGGAGGAGCAAGTTCCTCGCCAGCCGtgtgATGGCGGAGGAACTGACCAATGCCAGATCGGCTCTACAGCGGCAGACGCGAGATGCTCAGTGCGCCATTCAGGACCTGCTGAGTGAAAGAGAAGAGTTTTCCAGAGACATGACGCACACGCACAGGTGTCTGGAGCAGCTGCTGGTGTCTCTGCAGTGGGGGCGTCAGCAGACGTATTACCCCAGCGCTAAGCCGCTCAGCACTGGAGAACTGGCCACAGCCAATCACAAGCTGGCGGACGCCATCAACGCTCACCTGCTGGGCAAACTGGAGAACAGCGGCGGCAAGAAGAGCCCGAGCACTGAGATCTGCAACACACCGGCCGAGAAGATGGCGGAGAAGGTTCTGCGGAGTTTAGACCCGGTCTGCGTCTCCGAGCAGGAACACGACGCGTCTTCATCTGATTCGCCGTTTCTGCCCAACAGGAAGAGCATTGGCCGCTTCCACCCGTACACGCGCTACGAGAACATCACGTTTAACTGCTGCGAGCGCTGCCACGGGGAGATCATCGTTCTCTAGAGCCACGCTTCAGTATTACAGCAGAAACACACCAAAGACCAGCGctggagagagagacagagaaaacaTCATCAGGTCTGCTCTCCTACACACAGACTGATTAAAGACACAGCTCACCCTGAAGCCTGACAATTACCCCTGAGACATCAACAGTAGTCAACATGTGAAGTGGAGTTTTGTTTCAGGCGATCTTTTCTGATGATTTCAAATCTTGACTACTGTAGATCCAGTCAGAGGTATATAGTAAATTATCTTGGCCTTTTCAGCTCTATAATGGCAATAGGTGGgggatttattttcatttatttatttttctaatcaACAGTGCAAAAGAAGTCTAATAAAGCACATGCATTGTATGATATAAAGTGTCTTATGTAGCTCCAGGGGGTAAATAAAGCTCTCATATTAtgaatttatgcattttttaaatataaaaatattgttatttataactttataaaCCATTTCTCTCTGTTGTCGTCTTctgaatgttttgttttctcttcTTTGCACTTCAGCGTTTATTTAAACTGCGCATGTGCTTCACACTTGAGATTAAAAACACACTCCTGTCCAGCTGGTGGCGCTAATGCACTAATAAATACAGGAGTGTgtcttttaacttatttttaagtgttaaatGCATGCACAGTTGAAACCAATACAGAAGCACAGTGAAGAGAGAAATCAAAACACTCCTGTCCAGTTGGTGGCGCTAATGCACCAAAAATGCATCTTAAAGACAAACGACGCACAACAATTACGCAAATGAAATTAGAAAAATAATTAGAAatgaactttaaaaatgtaacttaaaattataattacaaactgcataataataataataataataataaaaaaccacTCTAATGCAccacaaaatgtgcattaaagatGAATGGTGGTCACCGGTAGTTACACAAAATAGTTTATAAGttttaaatattgatattttcCTAACAAAAAATGCTGGATTTACTGCAGAGACTTTTATTCGGCATGAGAGACACTTTTAATTAACAATAAATGCACTTTATTGGACATCTGATTTAAAAAACTGCCACCTGTTGCCTTTAGTAGAGCTGCAAAAGCCAAATATGATTTTCTAAACACCTCAGATTAGATTGGACTGAAAGAAGAGAGTCAAAGACACCTGGGATGTGTAAGTCATGGGATAATTCAGTGTTTTGGGTGAACGAACCCCTTTACAGAGCCTCAAATGAACTGTTATAGTGCAATACTCCTCGCCCTCTGAGAATGAGCAGCGTGAACATTCTGCTAGACGTCTCACTGTGTTTGAATATTGAAGAAATGCTGCATTAGAGTGAGTGGTTGATTCGTGGTGTAGATTTGACAGTGCGTGTGTGACTGATCTGAGTTCAGTgtttatttaatgcagtgtttctggATTATTATGTTGACTCTGATGCTGGATCATATTTATGCTTCATCAATATTCAGCTTTTTTGCATCACTCCCGGACCAGattctgtttttaaaacattttgctgatattttctctttgttgTGTTGCTCTCTAAATGAGCGAAATAAATAGTTTAGACTGAAA
>TCONS_00000042
GCTTCCGGTTTCGAGATGCCTGTGTGAACTCGACACTCCAAGCTGTGTGATTGGTTTTATACAACGCATCATATTTGAAGAGCAGAGATACTGACGCTtcagatagagAGGTGTCCAGCAGTGTTGTGTTCTGGAAGTGGAAAAGGAGTGTGCAGTAATGATGTCTGCTGAACTGATCATTAAAGATGTGTCAGTGGTGGCCGTGCGGGGCCCTGGCGATGGCATGGAGACAGATAAACCCCTGCCAGCCCCTGAGCAGCTGACGGAGGCCCCGCTCCAGAAGATCTGCTCTCCTAAACACAGCCCGAGAGTGGCCACCGGGTCTCCAGGAGTGCTGCACCTGGGCAAGGTGAGCCGGGACGCCTGTTTGGAGCTGGAGGCAGTGAGGATCGTGGTTCCCCGGGCTGCCATCATCCGCACCGGGCGCTCAGGGGCGCACACTGATGACAGGGGGTCTCCTCAACACGGGGACGAGCCTCCACCTGCTCCACCCTCACCTCCACCTCCA
>TCONS_00000043
GTGAAATGGTTAACCCAGAATgttagcaatgtttttttttttaatatattttaaagctacATATTTGTGTTCATTTTAAGCTGTGTGATTGGTTTTATACAACGCATCATATTTGAAGAGCAGAGATACTGACGCTtcagatagagAGGTGTCCAGCAGTGTTGTGTTCTGGAAGTGGAAAAGGAGTGTGCAGTAATGATGTCTGCTGAACTGATCATTAAAGATGTGTCAGTGGTGGCCGTGCGGGGCCCTGGCGATGGCATGGAGACAGATAAACCCCTGCCAGCCCCTGAGCAGCTGACGGAGGCCCCGCTCCAGAAGATCTGCTCTCCTAAACACAGCCCGAGAGTGGCCACCGGGTCTCCAGGAGTGCTGCACCTGGG
>TCONS_00000044
AGAGGTGTCCAGCAGTGTTGTGTTCTGGAAGTGGAAAAGGAGTGTGCAGTAATGATGTCTGCTGAACTGATCATTAAAGATGTGTCAGTGGTGGCCGTGCGGGGCCCTGGCGATGGCATGGAGACAGATAAACCCCTGCCAGCCCCTGAGCAGCTGACGGAGGCCCCGCTCCAGAAGATCTGCTCTCCTAAACACAGCCCGAGAGTGGCCACCGGGTCTCCAGGAGTGCTGCACCTGGGCAAGGTGAGCCGGGACGCCTGTTTGGAGCTGGAGGCAGTGAGGATCGTGGTTCCCCGGGCTGCCATCATCCGCACCGGGCGCTCAGGGGCGCACACTGATGACAGGGGGTCTCCTCAACACGGGGACGAGCCTCCACCTGCTCCACCCTCACCTCCACCTCCAGCAGAGCCGCTGCAGGAGTACAAGAACAGCCTGGAGAAACTGCAGAGCTCAGAGAGACGCCTGCTGCAGGATAAAGAAGGCCTGTCCAACCAGCTGAGGGTCCAGACCGAGgtgAACCGTGAGCTGAAGAAGCTGCTGGTGGCGTCAGTCGGTGATGATCTGCAGTATCACTTTGAGCGCCTGGCGAGAGAAAAAAACCACCTGATCCTGGAGAACGAGACTCTGTGCCGAAACCTGTCGCACACGGCGGAGCAGCTGGAGCGCATGAGCATTCAGTGTGACGTCTGGAGGAGCAAGTTCCTCGCCAGCCGtgtgATGGCGGAGGAACTGACCAATGCCAGATCGGCTCTACAGCGGCAGACGCGAGATGCTCAGTGCGCCATTCAGGACCTGCTGAGTGAAAGAGAAGAGTTTTCCAGAGACATGACGCACACGCACAGGTGTCTGGAGCAGCTGCTGGTGTCTCTGCAGTGGGGGCGTCAGCAGACGTATTACCCCAGCGCTAAGCCGCTCAGCACTGGAGAACTGGCCACAGCCAATCACAAGCTGGCGGACGCCATCAACGCTCACCTGCTGGGCAAACTGGAGAACAGCGGCGGCAAGAAGAGCCCGAGCACTGAGATCTGCAACACACCGGCCGAGAAGATGGCGGAGAAGGTTCTGCGGAGTTTAGACCCGGTCTGCGTCTCCGAGCAGGAACACGACGCGTCTTCATCTGATTCGCCGTTTCTGCCCAACAGGAAGAGCATTGGCCGCTTCCACCCGTACACGCGCTACGAGAACATCACGTTTAACTGCTGCGAGCGCTGCCACGGGGAGATCATCGTTCTCTAGAGCCACGCTTCAGTATTACAGCAGAAACACACCAAAGACCAGCGctggagagagagacagagaaaacaTCATCAGGTCTGCTCTCCTACACACAGACTGATTAAAGACACAGCTCACCCTGAAGCCTGACAATTACCCCTGAGACATCAACAGTAGTCAACATGTGAAGTGGAGTTTTGTTTCAGGCGATCTTTTCTGATGATTTCAAATCTTGACTACTGTAGATCCAGTCAGAGGTATATAGTAAATTATCTTGGCCTTTTCAGCTCTATAATGGCAATAGGTGGgggatttattttcatttatttatttttctaatcaACAGTGCAAAAGAAGTCTAATAAAGCACATGCATTGTATGATATAAAGTGTCTTATGTAGCTCCAGGGGGTAAATAAAGCTCTCATATTAtgaatttatgcattttttaaatataaaaatattgttatttataactttataaaCCATTTCTCTCTGTTGTCGTCTTctgaatgttttgttttctcttcTTTGCACTTCAGCGTTTATTTAAACTGCGCATGTGCTTCACACTTGAGATTAAAAACACACTCCTGTCCAGCTGGTGGCGCTAATGCACTAATAAATACAGGAGTGTgtcttttaacttatttttaagtgttaaatGCATGCACAGTTGAAACCAATACAGAAGCACAGTGAAGAGAGAAATCAAAACACTCCTGTCCAGTTGGTGGCGCTAATGCACCAAAAATGCATCTTAAAGACAAACGACGCACAACAATTACGCAAATGAAATTAGAAAAATAATTAGAAatgaactttaaaaatgtaacttaaaattataattacaaactgcataataataataataataataataaaaaaccacTCTAATGCAccacaaaatgtgcattaaagatGAATGGTGGTCACCGGTAGTTACACAAAATAGTTTATAAGttttaaatattgatattttcCTAACAAAAAATGCTGGATTTACTGCAGAGACTTTTATTCGGCATGAGAGACACTTTTAATTAACAATAAATGCACTTTATTGGACATCTGATTTAAAAAACTGCCACCTGTTGCCTTTAGTAGAGCTGCAAAAGCCAAATATGATTTTCTAAACACCTCAGATTAGATTGGACTGAAAGAAGAGAGTCAAAGACACCTGGGATGTGTAAGTCATGGGATAATTCAGTGTTTTGGGTGAACGAACCCCTTTACAGAGCCTCAAATGAACTGTTATAGTGCAATACTCCTCGCCCTCTGAGAATGAGCAGCGTGAACATTCTGCTAGACGTCTCACTGTGTTTGAATATTGAAGAAATGCTGCATTAGAGTGAGTGGTTGATTCGTGGTGTAGATTTGACAGTGCGTGTGTGACTGATCTGAGTTCAGTgtttatttaatgcagtgtttctggATTATTATGTTGACTCTGATGCTGGATCATATTTATGCTTCATCAATATTCAGCTTTTTTGCATCACTCCCGGACCAGattctgtttttaaaacattttgctgatattttctctttgttgTGTTGCTCTCTAAATGAGCGAAATAAATAGTTTAGACTG

Function

symbol description
blzf1 Acts upstream of or within Golgi organization; cell-matrix adhesion; and muscle tissue morphogenesis. Predicted to be active in Golgi membrane. Is expressed in head; notochord; and somite. Orthologous to human BLZF1 (basic leucine zipper nuclear factor 1).

GO:

id name namespace
GO:0043001 Golgi to plasma membrane protein transport biological_process
GO:0060415 muscle tissue morphogenesis biological_process
GO:0007030 Golgi organization biological_process
GO:0007160 cell-matrix adhesion biological_process
GO:0000139 Golgi membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-010724-1 Acts upstream of or within Golgi organization; cell-matrix adhesion; and muscle tissue morphogenesis. Predicted to be active in Golgi membrane. Is expressed in head; notochord; and somite. Orthologous to human BLZF1 (basic leucine zipper nuclear factor 1).

Ensembl:

ensembl_id ENSDARG00000011299

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000041 False 2896 mRNA 0.46 7 494297 505620
TCONS_00000042 False 508 mRNA 0.58 4 494341 497021
TCONS_00000043 False 383 mRNA 0.48 3 494873 496858
TCONS_00000044 True 2809 mRNA 0.46 6 496268 505617

Neighbor

gene id symbol gene type direction distance location
XLOC_000019 tpp2 coding upstream 50538 418869 ~ 443759 (+)
XLOC_000018 NA coding upstream 135735 355481 ~ 358562 (+)
XLOC_000017 cenpe coding upstream 198240 260039 ~ 296057 (+)
XLOC_000016 grk1a coding upstream 236159 245076 ~ 258138 (+)
XLOC_000015 tfdp1b coding upstream 250499 227241 ~ 243798 (+)
XLOC_000021 txnl4b coding downstream 8366 513986 ~ 518076 (+)
XLOC_000022 mrpl16 coding downstream 18768 524388 ~ 532429 (+)
XLOC_000023 mrpl39 coding downstream 27146 532766 ~ 591331 (+)
XLOC_000024 dre-mir-155 coding downstream 70824 576444 ~ 576521 (+)
XLOC_000025 jam2a coding downstream 88964 594584 ~ 608247 (+)
XLOC_000011 NA non-coding upstream 337015 156792 ~ 157282 (+)
XLOC_000026 NA non-coding downstream 289356 794976 ~ 911551 (+)
XLOC_000028 NA non-coding downstream 510192 1015812 ~ 1033638 (+)
XLOC_000029 CR450787.2 non-coding downstream 713071 1218691 ~ 1218805 (+)
XLOC_000030 NA non-coding downstream 809669 1315289 ~ 1342237 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000299_05927821_05933216 BLZF1 coding CI01000299 null 5927314 ~ 5934832 (-)