G19380 (LOC100194703)


Basic Information

Item Value
gene id G19380
gene name LOC100194703
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 20276590 ~ 20276895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU22556
aataacagactggaagcttcaaaaggagggtggtgcttggaatcattgttcttcctctgtcaatcatggttacctgcaaggaaacatgtgctatcatcattgctttgcaaaaaaagggcttcacaggcaaggatattactgccagtaagattgcacctaaatcaaccatttatcggatcatcaagaacttcaaggagagcggttcaattgttgtgaagaaggcttcagggcgcccaagaaagtccagcaagcgccaggaccttctcctaaagttgattcagctgcgggatcggggcaccaccagta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU22556 True 306 TUCP 0.39 1 20276590 20276895

Neighbor

gene id symbol gene type direction distance location
LOC110505394 LOC106573573 coding upstream 76024 20197087 ~ 20200566 (+)
LOC110532018 LOC106573567 coding upstream 182643 19977844 ~ 20093947 (+)
LOC110504002 LOC106573565 coding upstream 370379 19901680 ~ 19906211 (+)
LOC110503939 LOC106573564 coding upstream 410971 19863734 ~ 19865619 (+)
LOC110503761 NA coding upstream 421552 19850483 ~ 19855038 (+)
LOC110506010 polr2e coding downstream 41853 20318748 ~ 20321068 (+)
LOC110532051 NA coding downstream 231210 20508105 ~ 20522381 (+)
LOC110506309 hpln4 coding downstream 251390 20528285 ~ 20565572 (+)
borcs8 borcs8 coding downstream 646085 20922980 ~ 20931337 (+)
mef2b mef2b coding downstream 673212 20950107 ~ 20983313 (+)
G19376 NA non-coding upstream 9548 20266817 ~ 20267042 (+)
G19375 NA non-coding upstream 10842 20265467 ~ 20265748 (+)
G19374 NA non-coding upstream 12609 20263737 ~ 20263981 (+)
G19370 LOC106613719 non-coding upstream 18059 20258242 ~ 20258531 (+)
G19367 NA non-coding upstream 22833 20253473 ~ 20253757 (+)
G19386 NA non-coding downstream 6894 20283789 ~ 20284023 (+)
G19389 NA non-coding downstream 11915 20288810 ~ 20289034 (+)
G19390 NA non-coding downstream 13367 20290262 ~ 20290471 (+)
G19393 NA non-coding downstream 18885 20295780 ~ 20296078 (+)
G19399 NA non-coding downstream 32276 20309171 ~ 20309383 (+)
G19359 NA other upstream 33715 20242645 ~ 20242875 (+)
G19083 NA other upstream 360758 19915586 ~ 19915832 (+)
LOC110502506 LOC106573550 other upstream 701562 19568684 ~ 19575028 (+)
G18481 NA other upstream 711369 19564849 ~ 19565221 (+)
G19400 NA other downstream 32530 20309425 ~ 20309898 (+)
G20773 NA other downstream 1290650 21567545 ~ 21568188 (+)
G23109 NA other downstream 3261501 23538396 ~ 23538863 (+)
G23135 NA other downstream 3297697 23574592 ~ 23574995 (+)
LOC110511358 LOC106573633 other downstream 3596126 23872914 ~ 23905175 (+)

Expression


Co-expression Network