G20307



Basic Information


Item Value
gene id G20307
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 20862022 ~ 20863193 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU23680
gtccagtgtctatgtttttttgcccatcttaatcttttctttttattggccagtctgagaaatggctttttctttgcagctcTGCTTACGCCTACGTagacattccataaaaaatctgccgtttccagctacaatagtcatttacaacgttaacaatgtctacactgtatttctgatcaatttgatgttattttaatggacaaagaaagtgtttttctttcaaaaacaaggacatttccaagtgaccccaaacttttgatcgggagtgtatataaa

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU23680 True 276 lncRNA 0.38 2 20862022 20863193

Neighbor


gene id symbol gene type direction distance location
LOC110532063 ncan coding downstream 19111 20586586 ~ 20842911 (-)
trnaa-agc NA coding downstream 334198 20527752 ~ 20527824 (-)
LOC110506262 LOC106573581 coding downstream 380210 20367990 ~ 20481812 (-)
LOC110505853 LOC106573580 coding downstream 499956 20320374 ~ 20362066 (-)
gpx4a LOC106573579 coding downstream 543274 20311803 ~ 20318748 (-)
LOC110506380 NA coding upstream 22344 20885537 ~ 20902039 (-)
rfxank rfxank coding upstream 56433 20919626 ~ 20922933 (-)
tmem221 LOC106573585 coding upstream 64616 20927809 ~ 20932452 (-)
LOC110532071 LOC106573588 coding upstream 124863 20988056 ~ 21005209 (-)
LOC118945319 NA coding upstream 224175 21085298 ~ 21089250 (-)
G20299 NA non-coding downstream 9139 20852451 ~ 20852883 (-)
G20273 NA non-coding downstream 52437 20809355 ~ 20809585 (-)
G20272 NA non-coding downstream 53909 20807885 ~ 20808113 (-)
G20224 NA non-coding downstream 138404 20723140 ~ 20723618 (-)
G20209 NA non-coding downstream 166653 20694992 ~ 20695369 (-)
G20419 NA non-coding upstream 211706 21074899 ~ 21080084 (-)
G20423 NA non-coding upstream 231130 21094323 ~ 21094522 (-)
G20425 NA non-coding upstream 257709 21120902 ~ 21121351 (-)
G20456 LOC106573594 non-coding upstream 311291 21174484 ~ 21175171 (-)
G20266 NA other downstream 62014 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 1229405 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 1976370 18876547 ~ 18888907 (-)
LOC110497762 LOC106573859 other downstream 2467162 18390123 ~ 18450517 (-)
LOC110497564 LOC106573866 other downstream 2767084 18089520 ~ 18098678 (-)
LOC110507736 LOC106573601 other upstream 672740 21535882 ~ 21565723 (-)
G21993 NA other upstream 1518677 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 1976652 22839845 ~ 22843305 (-)
G23394 NA other upstream 2760833 23624026 ~ 23624349 (-)

Expression



Co-expression Network