G20981


Basic Information

Item Value
gene id G20981
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 21575784 ~ 21617373 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU24448
gaaagtttagacggatggacaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttcctagttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacacccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24448 True 463 lncRNA 0.54 2 21575784 21617373

Neighbor

gene id symbol gene type direction distance location
LOC110507736 LOC106573601 coding downstream 10061 21535882 ~ 21565723 (-)
cirbp LOC106573597 coding downstream 206896 21362992 ~ 21368888 (-)
LOC110507674 LOC105011525 coding downstream 212994 21357735 ~ 21362790 (-)
LOC118945781 NA coding downstream 333762 21232782 ~ 21242022 (-)
LOC110511465 LOC106573796 coding downstream 382627 21192344 ~ 21193157 (-)
LOC110532081 LOC106573605 coding upstream 68704 21686077 ~ 21733286 (-)
LOC110508721 LOC106573612 coding upstream 493631 22111004 ~ 22203625 (-)
LOC118966627 NA coding upstream 608832 22226205 ~ 22231598 (-)
LOC110508988 NA coding upstream 775605 22392978 ~ 22400323 (-)
LOC110509244 LOC106573616 coding upstream 817302 22434675 ~ 22437595 (-)
G20980 NA non-coding downstream 327 21572748 ~ 21575457 (-)
G20971 NA non-coding downstream 42670 21532803 ~ 21533114 (-)
G20960 NA non-coding downstream 57755 21517666 ~ 21518029 (-)
G20956 NA non-coding downstream 99297 21476136 ~ 21476487 (-)
G20727 NA non-coding downstream 125360 21450181 ~ 21450424 (-)
G21014 NA non-coding upstream 17172 21634545 ~ 21635023 (-)
G21016 NA non-coding upstream 67550 21684923 ~ 21685296 (-)
G21024 NA non-coding upstream 76957 21694330 ~ 21699240 (-)
G21063 bsg non-coding upstream 176033 21793406 ~ 21800722 (-)
G21062 NA non-coding upstream 185159 21802532 ~ 21805075 (-)
LOC118945319 NA other downstream 486534 21085298 ~ 21089250 (-)
G20266 NA other downstream 775776 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 1943167 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 2690132 18876547 ~ 18888907 (-)
G21993 NA other upstream 764497 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 1222472 22839845 ~ 22843305 (-)
G23394 NA other upstream 2006653 23624026 ~ 23624349 (-)
LOC110511130 LOC106573631 other upstream 2205327 23821656 ~ 23861029 (-)
G24542 NA other upstream 2605534 24222907 ~ 24226490 (-)

Expression


Co-expression Network