G21183



Basic Information


Item Value
gene id G21183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 21927636 ~ 21927878 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU24666
CCACCGCCGATGTGGCGAATGGATTCTTGACCATGACAGTTCATTTTGTGTAACaagtgtcaaatcaaatccaatgttttatttgtcacatacacatggttagcagatgttactgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtaatctaactaacaattccaaaactactgtcttgtacacagtgtaaggggataaagaatatgtacataagg

Function


NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU24666 True 243 lncRNA 0.39 1 21927636 21927878

Neighbor


gene id symbol gene type direction distance location
LOC110532081 LOC106573605 coding downstream 194350 21686077 ~ 21733286 (-)
LOC110508066 LOC106613744 coding downstream 323207 21587517 ~ 21604429 (-)
LOC110507736 LOC106573601 coding downstream 361913 21535882 ~ 21565723 (-)
cirbp LOC106573597 coding downstream 558748 21362992 ~ 21368888 (-)
LOC110507674 LOC105011525 coding downstream 564846 21357735 ~ 21362790 (-)
LOC110508721 LOC106573612 coding upstream 183126 22111004 ~ 22203625 (-)
LOC118966627 NA coding upstream 298327 22226205 ~ 22231598 (-)
LOC110508988 NA coding upstream 465100 22392978 ~ 22400323 (-)
LOC110509244 LOC106573616 coding upstream 506797 22434675 ~ 22437595 (-)
LOC110509312 NA coding upstream 535517 22463395 ~ 22487550 (-)
G21151 NA non-coding downstream 25217 21880890 ~ 21902419 (-)
G21155 NA non-coding downstream 40547 21886649 ~ 21887089 (-)
G21062 NA non-coding downstream 122561 21802532 ~ 21805075 (-)
G21063 bsg non-coding downstream 126914 21793406 ~ 21800722 (-)
G21024 NA non-coding downstream 228396 21694330 ~ 21699240 (-)
G21204 NA non-coding upstream 11230 21939108 ~ 21939403 (-)
G21212 NA non-coding upstream 22832 21950710 ~ 21950962 (-)
G21221 NA non-coding upstream 26784 21954662 ~ 21955815 (-)
G21223 NA non-coding upstream 28393 21956271 ~ 21956481 (-)
G21830 NA non-coding upstream 189283 22117161 ~ 22117669 (-)
LOC118945319 NA other downstream 838386 21085298 ~ 21089250 (-)
G20266 NA other downstream 1127628 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 2295019 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 3041984 18876547 ~ 18888907 (-)
G21993 NA other upstream 453992 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 911967 22839845 ~ 22843305 (-)
G23394 NA other upstream 1696148 23624026 ~ 23624349 (-)
LOC110511130 LOC106573631 other upstream 1894822 23821656 ~ 23861029 (-)
G24542 NA other upstream 2295029 24222907 ~ 24226490 (-)

Expression



Co-expression Network