G21221


Basic Information

Item Value
gene id G21221
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 21954662 ~ 21955815 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU24707
tatacatacacactatctATCACTCCTATACATACACACTAGCCATCACTCCTATACATGCACACTATCTATCACtcctatacatacacactatctATCACTCCTATACATACACACTAGCCATCACTCCTATACATGCACACTATCTATCACtcctatacatacacactatctATCACCcctatacatacacactatctATCACCCCTATACATACACACTAGCCATCACTCCTATACATGCACACTATCTATCACTtctatacatacacactatctATCACtcctatacatacacactatctATATCTATCACTCCGAATCATACACACTATCTACCACtcctatacatacacactatctATCACtcctatacatacacactatcactcctatacatacacactatctACCACTCCTATACATACACACAATCTATATCTATCACtCCTATACATACACACAATCTATATCTATCACtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU24707 True 482 lncRNA 0.43 2 21954662 21955815

Neighbor

gene id symbol gene type direction distance location
LOC110532081 LOC106573605 coding downstream 221376 21686077 ~ 21733286 (-)
LOC110508066 LOC106613744 coding downstream 350233 21587517 ~ 21604429 (-)
LOC110507736 LOC106573601 coding downstream 388939 21535882 ~ 21565723 (-)
cirbp LOC106573597 coding downstream 585774 21362992 ~ 21368888 (-)
LOC110507674 LOC105011525 coding downstream 591872 21357735 ~ 21362790 (-)
LOC110508721 LOC106573612 coding upstream 155189 22111004 ~ 22203625 (-)
LOC118966627 NA coding upstream 270390 22226205 ~ 22231598 (-)
LOC110508988 NA coding upstream 437163 22392978 ~ 22400323 (-)
LOC110509244 LOC106573616 coding upstream 478860 22434675 ~ 22437595 (-)
LOC110509312 NA coding upstream 507580 22463395 ~ 22487550 (-)
G21212 NA non-coding downstream 3700 21950710 ~ 21950962 (-)
G21204 NA non-coding downstream 15259 21939108 ~ 21939403 (-)
G21183 NA non-coding downstream 26784 21927636 ~ 21927878 (-)
G21151 NA non-coding downstream 52243 21880890 ~ 21902419 (-)
G21155 NA non-coding downstream 67573 21886649 ~ 21887089 (-)
G21223 NA non-coding upstream 456 21956271 ~ 21956481 (-)
G21830 NA non-coding upstream 161346 22117161 ~ 22117669 (-)
G21827 twf1 non-coding upstream 256628 22212443 ~ 22215444 (-)
G21900 NA non-coding upstream 293018 22248833 ~ 22249067 (-)
G21904 NA non-coding upstream 297147 22252962 ~ 22253252 (-)
LOC118945319 NA other downstream 865412 21085298 ~ 21089250 (-)
G20266 NA other downstream 1154654 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 2322045 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 3069010 18876547 ~ 18888907 (-)
G21993 NA other upstream 426055 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 884030 22839845 ~ 22843305 (-)
G23394 NA other upstream 1668211 23624026 ~ 23624349 (-)
LOC110511130 LOC106573631 other upstream 1866885 23821656 ~ 23861029 (-)
G24542 NA other upstream 2267092 24222907 ~ 24226490 (-)

Expression


Co-expression Network