G21904



Basic Information


Item Value
gene id G21904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22252962 ~ 22253252 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU25428
GGCTTATGATGCTCCTTGTTCTGCATGAGGGGGGTTGAACTAACCATGACTGAGCATTGTTAGTGTCAGCTATATGGAGTACTCTGCCTTTGTGTAAAGGTTAGGTTACTCGGTCCAACACTCAAGGGTGAGAGGACGACCAGCCTCaatattgcaataattaatcaatattaaataaagatgattgtttgaagaaatgaccaagtctctctcagtactgaatttccGCGACACAAGACtggcaacaaacaaacagaaaacgcaggtataaatacacagaggATAATGGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU25428 True 291 lncRNA 0.36 1 22252962 22253252

Neighbor


gene id symbol gene type direction distance location
LOC118966627 NA coding downstream 21364 22226205 ~ 22231598 (-)
LOC110508721 LOC106573612 coding downstream 49337 22111004 ~ 22203625 (-)
LOC110532081 LOC106573605 coding downstream 519676 21686077 ~ 21733286 (-)
LOC110508066 LOC106613744 coding downstream 648533 21587517 ~ 21604429 (-)
LOC110507736 LOC106573601 coding downstream 687239 21535882 ~ 21565723 (-)
LOC110508988 NA coding upstream 139726 22392978 ~ 22400323 (-)
LOC110509244 LOC106573616 coding upstream 181423 22434675 ~ 22437595 (-)
LOC110509312 NA coding upstream 210143 22463395 ~ 22487550 (-)
LOC110509621 LOC106573620 coding upstream 239308 22492560 ~ 22574938 (-)
LOC110509695 LOC106573621 coding upstream 327060 22580312 ~ 22592645 (-)
G21900 NA non-coding downstream 3895 22248833 ~ 22249067 (-)
G21827 twf1 non-coding downstream 37518 22212443 ~ 22215444 (-)
G21830 NA non-coding downstream 135293 22117161 ~ 22117669 (-)
G21223 NA non-coding downstream 296481 21956271 ~ 21956481 (-)
G21221 NA non-coding downstream 297147 21954662 ~ 21955815 (-)
G21913 NA non-coding upstream 11964 22265216 ~ 22265429 (-)
G21917 NA non-coding upstream 14510 22267762 ~ 22267965 (-)
G21954 LOC106573613 non-coding upstream 64230 22317482 ~ 22317947 (-)
G21956 NA non-coding upstream 66624 22319876 ~ 22320089 (-)
G21964 NA non-coding upstream 81585 22334837 ~ 22335094 (-)
LOC118945319 NA other downstream 1163712 21085298 ~ 21089250 (-)
G20266 NA other downstream 1452954 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 2620345 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 3367310 18876547 ~ 18888907 (-)
G21993 NA other upstream 128618 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 586593 22839845 ~ 22843305 (-)
G23394 NA other upstream 1370774 23624026 ~ 23624349 (-)
LOC110511130 LOC106573631 other upstream 1569448 23821656 ~ 23861029 (-)
G24542 NA other upstream 1969655 24222907 ~ 24226490 (-)

Expression



Co-expression Network