G21982



Basic Information


Item Value
gene id G21982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 22360643 ~ 22360908 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU25507
attttgggagtttctcccattcttctctgcagatcctctcaagctctgtcaggttggatggggagcattgctgaacagcaattttcaggtctctccagagatgttagatcgggttcaagtccaggctctggctgggccactcaaggcattcagagacttgtctcgaagccactccagtgttgtcttggctgtgtgcttagggtcgttatgttgtaaggtgaaccttcgccacagtctgagcgctctggagcaggatttcatcaagg

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU25507 True 266 lncRNA 0.41 1 22360643 22360908

Neighbor


gene id symbol gene type direction distance location
LOC118966627 NA coding downstream 129045 22226205 ~ 22231598 (-)
LOC110508721 LOC106573612 coding downstream 157018 22111004 ~ 22203625 (-)
LOC110532081 LOC106573605 coding downstream 627357 21686077 ~ 21733286 (-)
LOC110508066 LOC106613744 coding downstream 756214 21587517 ~ 21604429 (-)
LOC110507736 LOC106573601 coding downstream 794920 21535882 ~ 21565723 (-)
LOC110508988 NA coding upstream 32070 22392978 ~ 22400323 (-)
LOC110509244 LOC106573616 coding upstream 73767 22434675 ~ 22437595 (-)
LOC110509312 NA coding upstream 102487 22463395 ~ 22487550 (-)
LOC110509621 LOC106573620 coding upstream 131652 22492560 ~ 22574938 (-)
LOC110509695 LOC106573621 coding upstream 219404 22580312 ~ 22592645 (-)
G21964 NA non-coding downstream 25549 22334837 ~ 22335094 (-)
G21956 NA non-coding downstream 40554 22319876 ~ 22320089 (-)
G21954 LOC106573613 non-coding downstream 42696 22317482 ~ 22317947 (-)
G21917 NA non-coding downstream 92678 22267762 ~ 22267965 (-)
G21913 NA non-coding downstream 95214 22265216 ~ 22265429 (-)
G21988 NA non-coding upstream 5915 22366823 ~ 22367212 (-)
G21991 NA non-coding upstream 14873 22375781 ~ 22376012 (-)
G21994 LOC106573613 non-coding upstream 23438 22384346 ~ 22384678 (-)
G21996 LOC106573613 non-coding upstream 25773 22386681 ~ 22386933 (-)
LOC118945319 NA other downstream 1271393 21085298 ~ 21089250 (-)
G20266 NA other downstream 1560635 20799120 ~ 20800008 (-)
LOC110502937 ccl25 other downstream 2728026 19630376 ~ 19633058 (-)
mydgf LOC106573827 other downstream 3474991 18876547 ~ 18888907 (-)
G21993 NA other upstream 20962 22381870 ~ 22382208 (-)
G22350 LOC106573623 other upstream 478937 22839845 ~ 22843305 (-)
G23394 NA other upstream 1263118 23624026 ~ 23624349 (-)
LOC110511130 LOC106573631 other upstream 1461792 23821656 ~ 23861029 (-)
G24542 NA other upstream 1861999 24222907 ~ 24226490 (-)

Expression



Co-expression Network